TRIM45 14899

Name: TRIM45	Sequence: fasta or formatted (580aa)		NCBI GI: 224548921
Description: tripartite motif-containing 45 isoform 1		Referenced in: Tripartite Motif Family
Other entries for this name: alt prot [562aa] tripartite motif-containing 45 isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.2 30 2 C cysteine 5.9 34 2 D aspartate 5.0 29 1 E glutamate 6.7 39 2 F phenylalanine 2.8 16 1 G glycine 8.4 49 2 H histidine 4.3 25 1 I isoleucine 3.8 22 2 K lysine 7.1 41 2 L leucine 9.5 55 2 M methionine 1.6 9 1 N asparagine 2.4 14 1 P proline 4.7 27 1 Q glutamine 5.2 30 1 R arginine 5.9 34 2 S serine 5.5 32 2 T threonine 6.0 35 2 V valine 7.6 44 3 W tryptophan 0.7 4 1 Y tyrosine 1.9 11 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 tripartite motif-containing 45 isoform 1 TRIM45 0.960 tripartite motif-containing 45 isoform 2 TRIM3 0.110 tripartite motif-containing 3 TRIM3 0.110 tripartite motif-containing 3 TRIM2 0.107 tripartite motif-containing 2 isoform 2 TRIM2 0.107 tripartite motif-containing 2 isoform 1 TRIM71 0.105 tripartite motif-containing 71 TRIM33 0.097 tripartite motif-containing 33 protein isoform beta ... TRIM33 0.097 tripartite motif-containing 33 protein isoform alpha... TRIM24 0.087 transcriptional intermediary factor 1 alpha isoform ... TRIM24 0.087 transcriptional intermediary factor 1 alpha isoform ... TRIM56 0.082 tripartite motif-containing 56 TRIM28 0.067 tripartite motif-containing 28 protein TRIM36 0.061 tripartite motif-containing 36 isoform 1 MID2 0.050 midline 2 isoform 2 MID2 0.050 midline 2 isoform 1 TRIM42 0.046 tripartite motif-containing 42 MID1 0.045 midline 1 MID1 0.045 midline 1 MID1 0.045 midline 1 TRIM46 0.045 tripartite motif-containing 46 TRIM66 0.045 tripartite motif-containing 66 PML 0.042 promyelocytic leukemia protein isoform 11 PML 0.042 promyelocytic leukemia protein isoform 2 PML 0.042 promyelocytic leukemia protein isoform 9 PML 0.042 promyelocytic leukemia protein isoform 8 PML 0.042 promyelocytic leukemia protein isoform 6 PML 0.042 promyelocytic leukemia protein isoform 7 PML 0.042 promyelocytic leukemia protein isoform 10 PML 0.042 promyelocytic leukemia protein isoform 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.