SP140L 3305

Name: SP140L	Sequence: fasta or formatted (580aa)		NCBI GI: 134133279
Description: SP140 nuclear body protein-like		Referenced in: PHD Finger Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 3.6 21 1 C cysteine 3.6 21 2 D aspartate 5.3 31 1 E glutamate 9.1 53 2 F phenylalanine 4.5 26 2 G glycine 6.4 37 3 H histidine 2.2 13 1 I isoleucine 3.6 21 1 K lysine 9.5 55 3 L leucine 8.1 47 3 M methionine 2.6 15 1 N asparagine 5.0 29 2 P proline 4.5 26 2 Q glutamine 5.3 31 2 R arginine 7.2 42 2 S serine 7.2 42 2 T threonine 3.4 20 1 V valine 5.0 29 2 W tryptophan 1.0 6 1 Y tyrosine 2.6 15 4			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 SP140 nuclear body protein-like SP140 0.654 SP140 nuclear body protein isoform 1 SP100 0.325 nuclear antigen Sp100 isoform 1 SP110 0.239 SP110 nuclear body protein isoform c SP100 0.221 nuclear antigen Sp100 isoform 2 SP110 0.203 SP110 nuclear body protein isoform a SP110 0.080 SP110 nuclear body protein isoform b SP140 0.078 SP140 nuclear body protein isoform 2 TRIM33 0.069 tripartite motif-containing 33 protein isoform beta ... TRIM33 0.066 tripartite motif-containing 33 protein isoform alpha... TRIM24 0.066 transcriptional intermediary factor 1 alpha isoform ... TRIM24 0.066 transcriptional intermediary factor 1 alpha isoform ... TRIM66 0.055 tripartite motif-containing 66 AIRE 0.046 autoimmune regulator isoform 1 AIRE 0.033 autoimmune regulator isoform 2 DEAF1 0.032 deformed epidermal autoregulatory factor 1 TRIM28 0.032 tripartite motif-containing 28 protein BPTF 0.027 bromodomain PHD finger transcription factor isoform ... BPTF 0.027 bromodomain PHD finger transcription factor isoform ... PHF12 0.026 PHD finger protein 12 isoform 1 PHF12 0.026 PHD finger protein 12 isoform 2 PHF21A 0.024 BRAF35/HDAC2 complex isoform b PHF21A 0.024 BRAF35/HDAC2 complex isoform a CHD4 0.022 chromodomain helicase DNA binding protein 4 CHD5 0.022 chromodomain helicase DNA binding protein 5 CHD3 0.020 chromodomain helicase DNA binding protein 3 isoform ... CHD3 0.020 chromodomain helicase DNA binding protein 3 isoform ... CHD3 0.020 chromodomain helicase DNA binding protein 3 isoform... ZMYND8 0.019 zinc finger, MYND-type containing 8 isoform c NSD1 0.017 nuclear receptor binding SET domain protein 1 isofor... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.