PML 34698

Name: PML	Sequence: fasta or formatted (882aa)		NCBI GI: 67089149
Description: promyelocytic leukemia protein isoform 1		Referenced in: Nucleus and Nucleolus Tripartite Motif Family
Other entries for this name: alt prot [560aa] promyelocytic leukemia protein isoform 5 alt prot [829aa] promyelocytic leukemia protein isoform 9 alt prot [423aa] promyelocytic leukemia protein isoform 7 alt prot [585aa] promyelocytic leukemia protein isoform 10 alt prot [633aa] promyelocytic leukemia protein isoform 6 alt prot [435aa] promyelocytic leukemia protein isoform 8 alt prot [611aa] promyelocytic leukemia protein isoform 2 alt prot [781aa] promyelocytic leukemia protein isoform 11
Composition: Amino acid Percentage Count Longest homopolymer A alanine 10.9 96 2 C cysteine 3.3 29 2 D aspartate 4.2 37 2 E glutamate 8.4 74 3 F phenylalanine 3.7 33 2 G glycine 4.3 38 2 H histidine 1.8 16 1 I isoleucine 2.5 22 1 K lysine 3.4 30 2 L leucine 10.5 93 2 M methionine 1.7 15 1 N asparagine 2.2 19 2 P proline 7.5 66 3 Q glutamine 7.1 63 2 R arginine 7.8 69 2 S serine 9.4 83 3 T threonine 3.4 30 3 V valine 5.7 50 3 W tryptophan 0.6 5 1 Y tyrosine 1.6 14 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 promyelocytic leukemia protein isoform 1 PML 0.708 promyelocytic leukemia protein isoform 6 PML 0.655 promyelocytic leukemia protein isoform 9 PML 0.653 promyelocytic leukemia protein isoform 2 PML 0.641 promyelocytic leukemia protein isoform 10 PML 0.634 promyelocytic leukemia protein isoform 5 PML 0.588 promyelocytic leukemia protein isoform 11 PML 0.481 promyelocytic leukemia protein isoform 8 PML 0.481 promyelocytic leukemia protein isoform 7 LOC652346 0.280 PREDICTED: similar to PML protein LOC652671 0.107 PREDICTED: similar to promyelocytic leukemia protei... TRIM56 0.036 tripartite motif-containing 56 TRIM33 0.034 tripartite motif-containing 33 protein isoform beta ... TRIM33 0.034 tripartite motif-containing 33 protein isoform alpha... TRIM24 0.031 transcriptional intermediary factor 1 alpha isoform ... TRIM24 0.031 transcriptional intermediary factor 1 alpha isoform ... TRIM28 0.029 tripartite motif-containing 28 protein TRIM45 0.029 tripartite motif-containing 45 isoform 1 TRIM45 0.029 tripartite motif-containing 45 isoform 2 TRIM2 0.024 tripartite motif-containing 2 isoform 1 RNF207 0.023 ring finger protein 207 TRIM2 0.023 tripartite motif-containing 2 isoform 2 TRIM3 0.018 tripartite motif-containing 3 TRIM3 0.018 tripartite motif-containing 3 TRIM25 0.017 tripartite motif-containing 25 TRIM46 0.016 tripartite motif-containing 46 TRIM66 0.013 tripartite motif-containing 66 TRIM10 0.013 tripartite motif-containing 10 isoform 1 TRIM10 0.013 tripartite motif-containing 10 isoform 2 TRIM39 0.013 tripartite motif-containing 39 isoform 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.