TRIM24 30469

Name: TRIM24	Sequence: fasta or formatted (1050aa)		NCBI GI: 47419911
Description: transcriptional intermediary factor 1 alpha isoform a		Referenced in: Bromodomain Family Nonhistone Chromosomal Proteins PHD Finger Proteins Tripartite Motif Family
Other entries for this name: alt prot [1016aa] transcriptional intermediary factor 1 alpha isoform b
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.8 61 6 C cysteine 3.2 34 2 D aspartate 4.7 49 3 E glutamate 6.7 70 2 F phenylalanine 3.2 34 2 G glycine 4.3 45 2 H histidine 2.6 27 1 I isoleucine 4.6 48 2 K lysine 6.3 66 3 L leucine 7.8 82 3 M methionine 1.9 20 1 N asparagine 5.0 52 2 P proline 9.0 95 3 Q glutamine 7.3 77 4 R arginine 4.7 49 2 S serine 10.0 105 3 T threonine 4.6 48 2 V valine 5.9 62 2 W tryptophan 0.7 7 1 Y tyrosine 1.8 19 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 transcriptional intermediary factor 1 alpha isoform ... TRIM24 0.960 transcriptional intermediary factor 1 alpha isoform ... TRIM33 0.443 tripartite motif-containing 33 protein isoform beta ... TRIM33 0.438 tripartite motif-containing 33 protein isoform alpha... TRIM28 0.134 tripartite motif-containing 28 protein TRIM66 0.104 tripartite motif-containing 66 TRIM45 0.049 tripartite motif-containing 45 isoform 2 TRIM45 0.049 tripartite motif-containing 45 isoform 1 TRIM71 0.039 tripartite motif-containing 71 SP110 0.037 SP110 nuclear body protein isoform c SP140L 0.036 SP140 nuclear body protein-like BAZ2A 0.036 bromodomain adjacent to zinc finger domain, 2A [Homo... SP140 0.036 SP140 nuclear body protein isoform 1 SP100 0.035 nuclear antigen Sp100 isoform 1 BAZ2B 0.034 bromodomain adjacent to zinc finger domain, 2B [Homo... ZMYND8 0.031 zinc finger, MYND-type containing 8 isoform c ZMYND8 0.030 zinc finger, MYND-type containing 8 isoform a ZMYND8 0.030 zinc finger, MYND-type containing 8 isoform b CREBBP 0.028 CREB binding protein isoform b CREBBP 0.028 CREB binding protein isoform a TRIM3 0.028 tripartite motif-containing 3 TRIM3 0.028 tripartite motif-containing 3 TRIM2 0.028 tripartite motif-containing 2 isoform 2 TRIM2 0.028 tripartite motif-containing 2 isoform 1 PML 0.027 promyelocytic leukemia protein isoform 9 BPTF 0.027 bromodomain PHD finger transcription factor isoform ... BPTF 0.027 bromodomain PHD finger transcription factor isoform ... TRIM56 0.027 tripartite motif-containing 56 PML 0.026 promyelocytic leukemia protein isoform 11 PML 0.025 promyelocytic leukemia protein isoform 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.