TRIM45 14900

Name: TRIM45	Sequence: fasta or formatted (562aa)		NCBI GI: 224548923
Description: tripartite motif-containing 45 isoform 2		Referenced in: Tripartite Motif Family
Other entries for this name: alt prot [580aa] tripartite motif-containing 45 isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.2 29 2 C cysteine 5.9 33 2 D aspartate 5.0 28 1 E glutamate 6.6 37 2 F phenylalanine 2.8 16 1 G glycine 8.4 47 2 H histidine 4.4 25 1 I isoleucine 3.7 21 2 K lysine 6.9 39 2 L leucine 9.6 54 2 M methionine 1.6 9 1 N asparagine 2.3 13 1 P proline 4.6 26 1 Q glutamine 5.2 29 1 R arginine 6.0 34 2 S serine 5.7 32 2 T threonine 5.9 33 2 V valine 7.5 42 3 W tryptophan 0.7 4 1 Y tyrosine 2.0 11 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 tripartite motif-containing 45 isoform 2 TRIM45 0.990 tripartite motif-containing 45 isoform 1 TRIM71 0.100 tripartite motif-containing 71 TRIM33 0.100 tripartite motif-containing 33 protein isoform beta ... TRIM33 0.100 tripartite motif-containing 33 protein isoform alpha... TRIM3 0.098 tripartite motif-containing 3 TRIM3 0.098 tripartite motif-containing 3 TRIM2 0.094 tripartite motif-containing 2 isoform 2 TRIM2 0.094 tripartite motif-containing 2 isoform 1 TRIM24 0.089 transcriptional intermediary factor 1 alpha isoform ... TRIM24 0.089 transcriptional intermediary factor 1 alpha isoform ... TRIM56 0.084 tripartite motif-containing 56 TRIM28 0.069 tripartite motif-containing 28 protein TRIM36 0.063 tripartite motif-containing 36 isoform 1 MID2 0.051 midline 2 isoform 2 MID2 0.051 midline 2 isoform 1 TRIM42 0.048 tripartite motif-containing 42 MID1 0.047 midline 1 MID1 0.047 midline 1 MID1 0.047 midline 1 TRIM46 0.046 tripartite motif-containing 46 TRIM66 0.046 tripartite motif-containing 66 PML 0.043 promyelocytic leukemia protein isoform 11 PML 0.043 promyelocytic leukemia protein isoform 2 PML 0.043 promyelocytic leukemia protein isoform 9 PML 0.043 promyelocytic leukemia protein isoform 8 PML 0.043 promyelocytic leukemia protein isoform 6 PML 0.043 promyelocytic leukemia protein isoform 7 PML 0.043 promyelocytic leukemia protein isoform 10 PML 0.043 promyelocytic leukemia protein isoform 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.