TRIM24 30468

Name: TRIM24	Sequence: fasta or formatted (1016aa)		NCBI GI: 47419909
Description: transcriptional intermediary factor 1 alpha isoform b		Referenced in: Bromodomain Family Nonhistone Chromosomal Proteins PHD Finger Proteins Tripartite Motif Family
Other entries for this name: alt prot [1050aa] transcriptional intermediary factor 1 alpha isoform a
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.8 59 6 C cysteine 3.3 34 2 D aspartate 4.8 49 3 E glutamate 6.9 70 2 F phenylalanine 3.3 34 2 G glycine 4.2 43 2 H histidine 2.6 26 1 I isoleucine 4.5 46 2 K lysine 6.5 66 3 L leucine 8.0 81 3 M methionine 1.8 18 1 N asparagine 5.0 51 2 P proline 8.8 89 3 Q glutamine 6.8 69 4 R arginine 4.4 45 1 S serine 10.1 103 3 T threonine 4.7 48 2 V valine 5.8 59 2 W tryptophan 0.7 7 1 Y tyrosine 1.9 19 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 transcriptional intermediary factor 1 alpha isoform ... TRIM24 0.992 transcriptional intermediary factor 1 alpha isoform ... TRIM33 0.445 tripartite motif-containing 33 protein isoform beta ... TRIM33 0.440 tripartite motif-containing 33 protein isoform alpha... TRIM28 0.139 tripartite motif-containing 28 protein TRIM66 0.108 tripartite motif-containing 66 TRIM45 0.050 tripartite motif-containing 45 isoform 2 TRIM45 0.050 tripartite motif-containing 45 isoform 1 TRIM71 0.040 tripartite motif-containing 71 SP110 0.038 SP110 nuclear body protein isoform c SP140L 0.038 SP140 nuclear body protein-like BAZ2A 0.037 bromodomain adjacent to zinc finger domain, 2A [Homo... SP140 0.037 SP140 nuclear body protein isoform 1 SP100 0.037 nuclear antigen Sp100 isoform 1 BAZ2B 0.035 bromodomain adjacent to zinc finger domain, 2B [Homo... ZMYND8 0.032 zinc finger, MYND-type containing 8 isoform c ZMYND8 0.031 zinc finger, MYND-type containing 8 isoform a ZMYND8 0.031 zinc finger, MYND-type containing 8 isoform b PML 0.030 promyelocytic leukemia protein isoform 11 CREBBP 0.029 CREB binding protein isoform b CREBBP 0.029 CREB binding protein isoform a TRIM3 0.029 tripartite motif-containing 3 TRIM3 0.029 tripartite motif-containing 3 TRIM2 0.029 tripartite motif-containing 2 isoform 2 TRIM2 0.029 tripartite motif-containing 2 isoform 1 BPTF 0.028 bromodomain PHD finger transcription factor isoform ... BPTF 0.028 bromodomain PHD finger transcription factor isoform ... TRIM56 0.028 tripartite motif-containing 56 PML 0.026 promyelocytic leukemia protein isoform 10 PML 0.026 promyelocytic leukemia protein isoform 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.