Guide to the Human Genome
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Name: RNF207 Sequence: fasta or formatted (634aa) NCBI GI: 124487387
Description:

ring finger protein 207

Referenced in:

Tripartite Motif Family

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.0         57           4
 C cysteine            3.8         24           1
 D aspartate           4.9         31           2
 E glutamate           8.4         53           3
 F phenylalanine       2.5         16           1
 G glycine             5.0         32           2
 H histidine           4.7         30           2
 I isoleucine          3.0         19           1
 K lysine              4.6         29           2
 L leucine            12.1         77           4
 M methionine          1.7         11           1
 N asparagine          2.5         16           2
 P proline             5.5         35           2
 Q glutamine           6.2         39           1
 R arginine            6.8         43           2
 S serine              6.9         44           2
 T threonine           4.4         28           2
 V valine              5.5         35           2
 W tryptophan          0.5          3           1
 Y tyrosine            1.9         12           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ring finger protein 207 
TRIM9                 0.044   tripartite motif protein 9 isoform 2 
TRIM9                 0.044   tripartite motif protein 9 isoform 1 
TRIM56                0.040   tripartite motif-containing 56 
TRIM2                 0.035   tripartite motif-containing 2 isoform 2 
TRIM2                 0.035   tripartite motif-containing 2 isoform 1 
PML                   0.032   promyelocytic leukemia protein isoform 11 
PML                   0.032   promyelocytic leukemia protein isoform 2 
PML                   0.032   promyelocytic leukemia protein isoform 9 
PML                   0.032   promyelocytic leukemia protein isoform 8 
PML                   0.032   promyelocytic leukemia protein isoform 6 
PML                   0.032   promyelocytic leukemia protein isoform 7 
PML                   0.032   promyelocytic leukemia protein isoform 10 
PML                   0.032   promyelocytic leukemia protein isoform 1 
PML                   0.032   promyelocytic leukemia protein isoform 5 
TRIM3                 0.032   tripartite motif-containing 3 
TRIM3                 0.032   tripartite motif-containing 3 
TRIM28                0.031   tripartite motif-containing 28 protein 
TRIM45                0.027   tripartite motif-containing 45 isoform 2 
TRIM45                0.027   tripartite motif-containing 45 isoform 1 
TRIM54                0.025   ring finger protein 30 isoform 1 
TRIM33                0.023   tripartite motif-containing 33 protein isoform beta ...
TRIM33                0.023   tripartite motif-containing 33 protein isoform alpha...
TRIM23                0.023   ADP-ribosylation factor domain protein 1 isoform gam...
TRIM23                0.023   ADP-ribosylation factor domain protein 1 isoform bet...
TRIM23                0.023   ADP-ribosylation factor domain protein 1 isoform alph...
TRIM11                0.022   tripartite motif-containing 11 
TRIM67                0.021   tripartite motif-containing 67 
TRIM21                0.021   tripartite motif protein 21 
TRIM15                0.021   tripartite motif protein 15 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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