PML 5612

Name: PML	Sequence: fasta or formatted (829aa)		NCBI GI: 15451765
Description: promyelocytic leukemia protein isoform 9		Referenced in: Nucleus and Nucleolus Tripartite Motif Family
Other entries for this name: alt prot [560aa] promyelocytic leukemia protein isoform 5 alt prot [423aa] promyelocytic leukemia protein isoform 7 alt prot [585aa] promyelocytic leukemia protein isoform 10 alt prot [633aa] promyelocytic leukemia protein isoform 6 alt prot [882aa] promyelocytic leukemia protein isoform 1 alt prot [435aa] promyelocytic leukemia protein isoform 8 alt prot [611aa] promyelocytic leukemia protein isoform 2 alt prot [781aa] promyelocytic leukemia protein isoform 11
Composition: Amino acid Percentage Count Longest homopolymer A alanine 11.2 93 2 C cysteine 3.5 29 2 D aspartate 3.6 30 1 E glutamate 7.8 65 3 F phenylalanine 2.4 20 2 G glycine 4.6 38 1 H histidine 3.4 28 1 I isoleucine 2.7 22 1 K lysine 2.5 21 2 L leucine 7.6 63 2 M methionine 1.8 15 1 N asparagine 1.7 14 2 P proline 10.4 86 3 Q glutamine 7.5 62 2 R arginine 8.1 67 2 S serine 10.0 83 3 T threonine 3.6 30 3 V valine 5.7 47 3 W tryptophan 0.7 6 1 Y tyrosine 1.2 10 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 promyelocytic leukemia protein isoform 9 PML 0.930 promyelocytic leukemia protein isoform 11 PML 0.682 promyelocytic leukemia protein isoform 6 PML 0.682 promyelocytic leukemia protein isoform 1 PML 0.682 promyelocytic leukemia protein isoform 2 PML 0.660 promyelocytic leukemia protein isoform 5 PML 0.612 promyelocytic leukemia protein isoform 10 PML 0.501 promyelocytic leukemia protein isoform 8 PML 0.501 promyelocytic leukemia protein isoform 7 LOC652671 0.113 PREDICTED: similar to promyelocytic leukemia protei... TRIM56 0.038 tripartite motif-containing 56 TRIM33 0.035 tripartite motif-containing 33 protein isoform beta ... TRIM33 0.035 tripartite motif-containing 33 protein isoform alpha... TRIM24 0.035 transcriptional intermediary factor 1 alpha isoform ... TRIM24 0.033 transcriptional intermediary factor 1 alpha isoform ... TRIM28 0.031 tripartite motif-containing 28 protein TRIM45 0.030 tripartite motif-containing 45 isoform 1 TRIM45 0.030 tripartite motif-containing 45 isoform 2 TRIM2 0.025 tripartite motif-containing 2 isoform 1 RNF207 0.024 ring finger protein 207 TRIM2 0.024 tripartite motif-containing 2 isoform 2 TRIM3 0.019 tripartite motif-containing 3 TRIM3 0.019 tripartite motif-containing 3 TRIM25 0.017 tripartite motif-containing 25 TRIM46 0.016 tripartite motif-containing 46 FLJ22184 0.015 PREDICTED: hypothetical protein FLJ22184 TRIM66 0.014 tripartite motif-containing 66 TRIM10 0.014 tripartite motif-containing 10 isoform 1 TRIM10 0.014 tripartite motif-containing 10 isoform 2 FLJ22184 0.013 PREDICTED: hypothetical protein FLJ22184 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.