TRIM66 12541

Name: TRIM66	Sequence: fasta or formatted (1216aa)		NCBI GI: 209977097
Description: tripartite motif-containing 66		Referenced in: Nonhistone Chromosomal Proteins PHD Finger Proteins Tripartite Motif Family
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.7 69 3 C cysteine 3.7 45 2 D aspartate 2.5 30 1 E glutamate 7.4 90 2 F phenylalanine 2.9 35 2 G glycine 4.5 55 2 H histidine 3.6 44 2 I isoleucine 3.2 39 2 K lysine 4.9 59 2 L leucine 9.5 115 3 M methionine 2.5 31 1 N asparagine 3.2 39 2 P proline 10.7 130 6 Q glutamine 8.8 107 3 R arginine 4.2 51 4 S serine 10.7 130 5 T threonine 4.5 55 2 V valine 5.4 66 2 W tryptophan 0.8 10 1 Y tyrosine 1.3 16 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 tripartite motif-containing 66 TRIM24 0.089 transcriptional intermediary factor 1 alpha isoform ... TRIM24 0.089 transcriptional intermediary factor 1 alpha isoform ... TRIM33 0.088 tripartite motif-containing 33 protein isoform beta ... TRIM33 0.084 tripartite motif-containing 33 protein isoform alpha... TRIM28 0.057 tripartite motif-containing 28 protein BAZ2A 0.029 bromodomain adjacent to zinc finger domain, 2A [Homo... SP140L 0.026 SP140 nuclear body protein-like SP140 0.026 SP140 nuclear body protein isoform 1 FLJ22184 0.025 PREDICTED: hypothetical protein FLJ22184 SP110 0.023 SP110 nuclear body protein isoform c SP100 0.022 nuclear antigen Sp100 isoform 1 TRIM71 0.022 tripartite motif-containing 71 TRIM45 0.021 tripartite motif-containing 45 isoform 2 TRIM45 0.021 tripartite motif-containing 45 isoform 1 AIRE 0.020 autoimmune regulator isoform 1 AIRE 0.020 autoimmune regulator isoform 2 PCLO 0.020 piccolo isoform 2 PCLO 0.020 piccolo isoform 1 MED15 0.019 mediator complex subunit 15 isoform b BAZ2B 0.019 bromodomain adjacent to zinc finger domain, 2B [Homo... MED15 0.019 mediator complex subunit 15 isoform a SP110 0.019 SP110 nuclear body protein isoform a BRD2 0.018 bromodomain containing 2 BRD2 0.018 bromodomain containing 2 ZMYND8 0.018 zinc finger, MYND-type containing 8 isoform c ZMYND8 0.018 zinc finger, MYND-type containing 8 isoform a ZMYND8 0.018 zinc finger, MYND-type containing 8 isoform b TRIM2 0.017 tripartite motif-containing 2 isoform 2 TRIM2 0.017 tripartite motif-containing 2 isoform 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.