Guide to the Human Genome
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Name: LCP2 Sequence: fasta or formatted (533aa) NCBI GI: 5031855
Description:

lymphocyte cytosolic protein 2

Referenced in:

Neutrophils, Eosinophils, and Basophils

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.7         25           2
 C cysteine            0.4          2           1
 D aspartate           6.6         35           2
 E glutamate           8.1         43           4
 F phenylalanine       3.6         19           1
 G glycine             4.5         24           2
 H histidine           2.1         11           1
 I isoleucine          3.4         18           2
 K lysine              6.6         35           2
 L leucine             7.7         41           3
 M methionine          1.5          8           1
 N asparagine          5.4         29           1
 P proline            15.2         81           4
 Q glutamine           3.6         19           2
 R arginine            6.6         35           2
 S serine              9.4         50           2
 T threonine           3.8         20           3
 V valine              3.0         16           1
 W tryptophan          0.8          4           1
 Y tyrosine            3.4         18           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   lymphocyte cytosolic protein 2 
BLNK                  0.108   B-cell linker isoform 1 
BLNK                  0.094   B-cell linker isoform 2 
CLNK                  0.094   mast cell immunoreceptor signal transducer 
WIPF1                 0.054   WAS/WASL interacting protein family, member 1 [Homo...
WIPF1                 0.054   WAS/WASL interacting protein family, member 1 
PRB2                  0.048   proline-rich protein BstNI subfamily 2 
SH2D6                 0.044   SH2 domain containing 6 
SRRM1                 0.043   serine/arginine repetitive matrix 1 
PRB4                  0.041   proline-rich protein BstNI subfamily 4 precursor [Ho...
PRB1                  0.040   proline-rich protein BstNI subfamily 1 isoform 1 pre...
MLL2                  0.039   myeloid/lymphoid or mixed-lineage leukemia 2 
NCOA6                 0.039   nuclear receptor coactivator 6 
FLJ22184              0.039   PREDICTED: hypothetical protein FLJ22184 
PRG4                  0.037   proteoglycan 4 isoform D 
PRG4                  0.037   proteoglycan 4 isoform C 
PRG4                  0.037   proteoglycan 4 isoform B 
PRG4                  0.037   proteoglycan 4 isoform A 
RBM33                 0.035   RNA binding motif protein 33 
CASKIN1               0.034   CASK interacting protein 1 
FMN2                  0.034   formin 2 
FLJ22184              0.032   PREDICTED: hypothetical protein FLJ22184 
FLJ22184              0.032   PREDICTED: hypothetical protein LOC80164 
RAPH1                 0.032   Ras association and pleckstrin homology domains 1 is...
MLL4                  0.032   myeloid/lymphoid or mixed-lineage leukemia 4 
PRB3                  0.032   proline-rich protein BstNI subfamily 3 precursor [H...
TTN                   0.032   titin isoform N2-A 
MAPK1IP1L             0.032   MAPK-interacting and spindle-stabilizing protein [Ho...
BRD4                  0.031   bromodomain-containing protein 4 isoform long 
RERE                  0.031   atrophin-1 like protein isoform b 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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