Guide to the Human Genome
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Name: BLNK Sequence: fasta or formatted (456aa) NCBI GI: 7019535
Description:

B-cell linker isoform 1

Referenced in:

B cells
Neutrophils, Eosinophils, and Basophils

Other entries for this name:
alt prot [433aa] B-cell linker isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.2         33           2
 C cysteine            0.7          3           1
 D aspartate           5.0         23           2
 E glutamate           7.7         35           3
 F phenylalanine       2.4         11           2
 G glycine             4.2         19           2
 H histidine           2.6         12           1
 I isoleucine          3.5         16           2
 K lysine              8.1         37           2
 L leucine             5.3         24           2
 M methionine          1.3          6           1
 N asparagine          4.8         22           2
 P proline            12.5         57           3
 Q glutamine           4.4         20           2
 R arginine            5.0         23           2
 S serine             11.0         50           3
 T threonine           4.8         22           2
 V valine              5.7         26           2
 W tryptophan          0.9          4           1
 Y tyrosine            2.9         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   B-cell linker isoform 1 
BLNK                  0.935   B-cell linker isoform 2 
LCP2                  0.130   lymphocyte cytosolic protein 2 
CLNK                  0.089   mast cell immunoreceptor signal transducer 
SH2D6                 0.087   SH2 domain containing 6 
RERE                  0.038   atrophin-1 like protein isoform b 
RERE                  0.038   atrophin-1 like protein isoform a 
RERE                  0.038   atrophin-1 like protein isoform a 
MLL2                  0.035   myeloid/lymphoid or mixed-lineage leukemia 2 
WASF1                 0.034   Wiskott-Aldrich syndrome protein family member 1 [Ho...
WASF1                 0.034   Wiskott-Aldrich syndrome protein family member 1 [Ho...
WASF1                 0.034   Wiskott-Aldrich syndrome protein family member 1 [Ho...
WASF1                 0.034   Wiskott-Aldrich syndrome protein family member 1 [Hom...
PRG4                  0.032   proteoglycan 4 isoform D 
PRG4                  0.032   proteoglycan 4 isoform C 
PRG4                  0.032   proteoglycan 4 isoform B 
PRG4                  0.032   proteoglycan 4 isoform A 
BRD4                  0.031   bromodomain-containing protein 4 isoform long 
WIPF1                 0.030   WAS/WASL interacting protein family, member 1 [Homo...
WIPF1                 0.030   WAS/WASL interacting protein family, member 1 
TENC1                 0.030   tensin like C1 domain containing phosphatase isoform...
TENC1                 0.030   tensin like C1 domain containing phosphatase isoform...
TENC1                 0.030   tensin like C1 domain containing phosphatase isoform...
MLL4                  0.027   myeloid/lymphoid or mixed-lineage leukemia 4 
MICALL1               0.027   molecule interacting with Rab13 
SH3BP1                0.026   SH3-domain binding protein 1 
AFF1                  0.026   myeloid/lymphoid or mixed-lineage leukemia trithorax ...
PCLO                  0.026   piccolo isoform 2 
PCLO                  0.026   piccolo isoform 1 
TTN                   0.025   titin isoform N2-A 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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