SMAD4 31228

Name: SMAD4	Sequence: fasta or formatted (552aa)		NCBI GI: 4885457
Description: mothers against decapentaplegic homolog 4		Referenced in: TGF-beta Family
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.7 48 5 C cysteine 2.5 14 1 D aspartate 4.7 26 2 E glutamate 4.5 25 1 F phenylalanine 2.4 13 1 G glycine 7.2 40 2 H histidine 5.4 30 2 I isoleucine 5.3 29 1 K lysine 3.6 20 2 L leucine 7.4 41 2 M methionine 1.8 10 2 N asparagine 3.4 19 1 P proline 8.2 45 2 Q glutamine 5.8 32 3 R arginine 4.3 24 2 S serine 8.2 45 2 T threonine 5.8 32 3 V valine 6.0 33 2 W tryptophan 1.4 8 1 Y tyrosine 3.3 18 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 mothers against decapentaplegic homolog 4 SMAD9 0.222 SMAD family member 9 isoform a SMAD3 0.219 mothers against decapentaplegic homolog 3 isoform 1 [... SMAD5 0.215 SMAD, mothers against DPP homolog 5 SMAD5 0.215 SMAD, mothers against DPP homolog 5 SMAD5 0.215 SMAD, mothers against DPP homolog 5 SMAD1 0.213 Sma- and Mad-related protein 1 SMAD1 0.213 Sma- and Mad-related protein 1 SMAD9 0.187 SMAD family member 9 isoform b SMAD3 0.160 mothers against decapentaplegic homolog 3 isoform 3... SMAD3 0.137 mothers against decapentaplegic homolog 3 isoform 2... SMAD3 0.129 mothers against decapentaplegic homolog 3 isoform 4... SMAD2 0.127 Sma- and Mad-related protein 2 isoform 1 SMAD2 0.127 Sma- and Mad-related protein 2 isoform 1 SMAD2 0.127 Sma- and Mad-related protein 2 isoform 2 SMAD6 0.066 SMAD family member 6 isoform 2 SMAD6 0.066 SMAD family member 6 isoform 1 SMAD7 0.056 SMAD family member 7 POU3F3 0.016 POU class 3 homeobox 3 ASXL2 0.015 additional sex combs like 2 FOXJ3 0.015 forkhead box J3 ARHGEF5 0.012 rho guanine nucleotide exchange factor 5 ARID1A 0.011 AT rich interactive domain 1A isoform a ARID1A 0.011 AT rich interactive domain 1A isoform b NCAN 0.011 chondroitin sulfate proteoglycan 3 LOC727832 0.010 golgi autoantigen, golgin subfamily a-like LOC283767 0.010 golgi autoantigen, golgin subfamily a-like MUC6 0.010 mucin 6, gastric SHANK1 0.010 SH3 and multiple ankyrin repeat domains 1 RLIM 0.009 ring finger protein, LIM domain interacting Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.