HIST1H1C 31208

Name: HIST1H1C	Sequence: fasta or formatted (213aa)		NCBI GI: 4885375
Description: histone cluster 1, H1c		Referenced in: Histones, Related Proteins, and Modifying Enzymes
Composition: Amino acid Percentage Count Longest homopolymer A alanine 22.5 48 3 C cysteine 0.0 0 0 D aspartate 0.5 1 1 E glutamate 2.8 6 1 F phenylalanine 0.5 1 1 G glycine 7.5 16 2 H histidine 0.0 0 0 I isoleucine 0.9 2 1 K lysine 27.7 59 3 L leucine 4.2 9 1 M methionine 0.5 1 1 N asparagine 1.4 3 2 P proline 9.9 21 2 Q glutamine 0.5 1 1 R arginine 1.4 3 1 S serine 7.0 15 1 T threonine 5.2 11 1 V valine 7.0 15 2 W tryptophan 0.0 0 0 Y tyrosine 0.5 1 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 histone cluster 1, H1c HIST1H1E 0.832 histone cluster 1, H1e HIST1H1D 0.792 histone cluster 1, H1d HIST1H1B 0.721 histone cluster 1, H1b HIST1H1A 0.579 histone cluster 1, H1a HIST1H1T 0.387 histone cluster 1, H1t H1F0 0.239 H1 histone family, member 0 H1FX 0.197 H1 histone family, member X H1FOO 0.113 H1 histone family, member O, oocyte-specific NEFH 0.105 neurofilament, heavy polypeptide 200kDa H1FNT 0.092 H1 histone family, member N, testis-specific SHPRH 0.084 SNF2 histone linker PHD RING helicase isoform a [Ho... SHPRH 0.084 SNF2 histone linker PHD RING helicase isoform b [Hom... MARCKS 0.082 myristoylated alanine-rich protein kinase C substra... MAP1B 0.071 microtubule-associated protein 1B HP1BP3 0.063 HP1-BP74 PRG4 0.063 proteoglycan 4 isoform D PRG4 0.063 proteoglycan 4 isoform C PRG4 0.063 proteoglycan 4 isoform B PRG4 0.063 proteoglycan 4 isoform A FOXO1 0.061 forkhead box O1 NOLC1 0.061 nucleolar and coiled-body phosphoprotein 1 LOC100292370 0.061 PREDICTED: hypothetical protein AEBP1 0.058 adipocyte enhancer binding protein 1 precursor [Homo... NCL 0.053 nucleolin COL6A3 0.053 alpha 3 type VI collagen isoform 5 precursor COL6A3 0.053 alpha 3 type VI collagen isoform 1 precursor COL6A3 0.053 alpha 3 type VI collagen isoform 4 precursor CHD6 0.053 chromodomain helicase DNA binding protein 6 RSL1D1 0.050 ribosomal L1 domain containing 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.