CHD6 24963

Name: CHD6	Sequence: fasta or formatted (2715aa)		NCBI GI: 29244924
Description: chromodomain helicase DNA binding protein 6		Referenced in: Nonhistone Chromosomal Proteins PHD Finger Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.5 176 2 C cysteine 1.8 50 2 D aspartate 5.9 161 3 E glutamate 9.4 256 7 F phenylalanine 3.2 87 1 G glycine 6.3 172 4 H histidine 2.2 61 1 I isoleucine 4.4 120 2 K lysine 8.0 218 4 L leucine 9.1 246 2 M methionine 2.4 66 2 N asparagine 3.8 104 2 P proline 6.1 165 2 Q glutamine 4.3 118 2 R arginine 5.7 155 4 S serine 7.9 214 3 T threonine 5.1 139 2 V valine 4.2 114 2 W tryptophan 1.2 33 2 Y tyrosine 2.2 60 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 chromodomain helicase DNA binding protein 6 CHD7 0.366 chromodomain helicase DNA binding protein 7 CHD9 0.346 chromodomain helicase DNA binding protein 9 CHD8 0.346 chromodomain helicase DNA binding protein 8 CHD2 0.093 chromodomain helicase DNA binding protein 2 isoform... CHD4 0.090 chromodomain helicase DNA binding protein 4 CHD1 0.090 chromodomain helicase DNA binding protein 1 CHD3 0.089 chromodomain helicase DNA binding protein 3 isoform ... CHD3 0.089 chromodomain helicase DNA binding protein 3 isoform ... CHD3 0.089 chromodomain helicase DNA binding protein 3 isoform... CHD5 0.086 chromodomain helicase DNA binding protein 5 SMARCA1 0.070 SWI/SNF-related matrix-associated actin-dependent r... SMARCA5 0.069 SWI/SNF-related matrix-associated actin-dependent re... SMARCA1 0.068 SWI/SNF-related matrix-associated actin-dependent re... CHD1L 0.065 chromodomain helicase DNA binding protein 1-like [H... HELLS 0.062 helicase, lymphoid-specific SMARCA2 0.062 SWI/SNF-related matrix-associated actin-dependent re... SMARCA2 0.062 SWI/SNF-related matrix-associated actin-dependent re... SMARCA4 0.061 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.061 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.061 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.061 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.061 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.061 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.061 SWI/SNF-related matrix-associated actin-dependent re... SMARCAD1 0.045 SWI/SNF-related, matrix-associated actin-dependent ... SMARCAD1 0.045 SWI/SNF-related, matrix-associated actin-dependent ... SMARCAD1 0.045 SWI/SNF-related, matrix-associated actin-dependent ... ERCC6 0.041 excision repair cross-complementing rodent repair def... C9orf102 0.037 RAD26L hypothetical protein Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.