| Name: HIST1H1D | Sequence: fasta or formatted (221aa) | NCBI GI: 4885377 | |
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Description: histone cluster 1, H1d
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Referenced in: Histones, Related Proteins, and Modifying Enzymes
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Composition:
Amino acid Percentage Count Longest homopolymer A alanine 20.8 46 3 C cysteine 0.0 0 0 D aspartate 0.5 1 1 E glutamate 2.7 6 1 F phenylalanine 0.5 1 1 G glycine 7.7 17 1 H histidine 0.0 0 0 I isoleucine 1.8 4 1 K lysine 27.6 61 3 L leucine 4.5 10 1 M methionine 0.5 1 1 N asparagine 1.4 3 2 P proline 10.0 22 2 Q glutamine 0.9 2 1 R arginine 1.8 4 1 S serine 7.2 16 1 T threonine 6.3 14 1 V valine 5.4 12 1 W tryptophan 0.0 0 0 Y tyrosine 0.5 1 1 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary 
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 histone cluster 1, H1d HIST1H1E 0.824 histone cluster 1, H1e HIST1H1C 0.758 histone cluster 1, H1c HIST1H1B 0.720 histone cluster 1, H1b HIST1H1A 0.579 histone cluster 1, H1a HIST1H1T 0.353 histone cluster 1, H1t H1F0 0.209 H1 histone family, member 0 H1FX 0.174 H1 histone family, member X NEFH 0.106 neurofilament, heavy polypeptide 200kDa H1FOO 0.103 H1 histone family, member O, oocyte-specific H1FNT 0.093 H1 histone family, member N, testis-specific SHPRH 0.088 SNF2 histone linker PHD RING helicase isoform a [Ho... SHPRH 0.088 SNF2 histone linker PHD RING helicase isoform b [Hom... MAP1B 0.078 microtubule-associated protein 1B AEBP1 0.076 adipocyte enhancer binding protein 1 precursor [Homo... NOLC1 0.063 nucleolar and coiled-body phosphoprotein 1 HP1BP3 0.060 HP1-BP74 COL6A3 0.058 alpha 3 type VI collagen isoform 5 precursor COL6A3 0.058 alpha 3 type VI collagen isoform 1 precursor COL6A3 0.058 alpha 3 type VI collagen isoform 4 precursor CHD6 0.058 chromodomain helicase DNA binding protein 6 LOC100292370 0.053 PREDICTED: hypothetical protein LOC100292383 0.053 PREDICTED: hypothetical protein LOC100292035 0.050 PREDICTED: hypothetical protein XP_002345623 TCOF1 0.050 Treacher Collins-Franceschetti syndrome 1 isoform f... TCOF1 0.050 Treacher Collins-Franceschetti syndrome 1 isoform e... TCOF1 0.050 Treacher Collins-Franceschetti syndrome 1 isoform d... TCOF1 0.050 Treacher Collins-Franceschetti syndrome 1 isoform b ... TCOF1 0.050 Treacher Collins-Franceschetti syndrome 1 isoform a ... TCOF1 0.050 Treacher Collins-Franceschetti syndrome 1 isoform c ...Human BLASTP results (used to prepare the table) | |||
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.
