HIST1H1T 12130

Name: HIST1H1T	Sequence: fasta or formatted (207aa)		NCBI GI: 20544168
Description: histone cluster 1, H1t		Referenced in: Histones, Related Proteins, and Modifying Enzymes Testes and Sperm
Composition: Amino acid Percentage Count Longest homopolymer A alanine 12.1 25 3 C cysteine 0.0 0 0 D aspartate 1.0 2 1 E glutamate 2.9 6 1 F phenylalanine 0.5 1 1 G glycine 5.8 12 1 H histidine 1.0 2 2 I isoleucine 2.4 5 1 K lysine 19.3 40 2 L leucine 7.7 16 1 M methionine 1.4 3 1 N asparagine 2.9 6 2 P proline 4.3 9 1 Q glutamine 2.9 6 3 R arginine 6.8 14 1 S serine 13.5 28 1 T threonine 6.8 14 2 V valine 8.2 17 1 W tryptophan 0.0 0 0 Y tyrosine 0.5 1 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 histone cluster 1, H1t HIST1H1E 0.438 histone cluster 1, H1e HIST1H1B 0.410 histone cluster 1, H1b HIST1H1A 0.410 histone cluster 1, H1a HIST1H1C 0.407 histone cluster 1, H1c HIST1H1D 0.388 histone cluster 1, H1d H1F0 0.169 H1 histone family, member 0 H1FX 0.122 H1 histone family, member X H1FNT 0.075 H1 histone family, member N, testis-specific HP1BP3 0.069 HP1-BP74 SHPRH 0.066 SNF2 histone linker PHD RING helicase isoform a [Ho... SHPRH 0.066 SNF2 histone linker PHD RING helicase isoform b [Hom... H1FOO 0.066 H1 histone family, member O, oocyte-specific PHACTR2 0.044 phosphatase and actin regulator 2 isoform 4 PHACTR2 0.044 phosphatase and actin regulator 2 isoform 2 NEFH 0.042 neurofilament, heavy polypeptide 200kDa CHD7 0.033 chromodomain helicase DNA binding protein 7 TCOF1 0.030 Treacher Collins-Franceschetti syndrome 1 isoform f... TCOF1 0.030 Treacher Collins-Franceschetti syndrome 1 isoform e... TCOF1 0.030 Treacher Collins-Franceschetti syndrome 1 isoform d... TCOF1 0.030 Treacher Collins-Franceschetti syndrome 1 isoform b ... TCOF1 0.030 Treacher Collins-Franceschetti syndrome 1 isoform a ... MAP1B 0.030 microtubule-associated protein 1B LOC731605 0.030 PREDICTED: similar to BCL2-associated transcription... BCLAF1 0.030 BCL2-associated transcription factor 1 isoform 3 [H... BCLAF1 0.030 BCL2-associated transcription factor 1 isoform 2 [H... BCLAF1 0.030 BCL2-associated transcription factor 1 isoform 1 [Hom... MYO18B 0.030 myosin XVIIIB LOC731605 0.028 PREDICTED: similar to BCL2-associated transcription... SFRS18 0.028 splicing factor, arginine/serine-rich 130 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.