HIST1H1A 31207

Name: HIST1H1A	Sequence: fasta or formatted (215aa)		NCBI GI: 4885373
Description: histone cluster 1, H1a		Referenced in: Histones, Related Proteins, and Modifying Enzymes
Composition: Amino acid Percentage Count Longest homopolymer A alanine 19.5 42 4 C cysteine 0.0 0 0 D aspartate 0.5 1 1 E glutamate 2.8 6 1 F phenylalanine 0.5 1 1 G glycine 6.0 13 2 H histidine 0.0 0 0 I isoleucine 1.4 3 1 K lysine 26.5 57 3 L leucine 4.7 10 1 M methionine 0.5 1 1 N asparagine 1.9 4 2 P proline 8.8 19 2 Q glutamine 0.9 2 1 R arginine 1.9 4 1 S serine 10.7 23 3 T threonine 6.5 14 1 V valine 6.5 14 1 W tryptophan 0.0 0 0 Y tyrosine 0.5 1 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 histone cluster 1, H1a HIST1H1E 0.647 histone cluster 1, H1e HIST1H1D 0.605 histone cluster 1, H1d HIST1H1B 0.600 histone cluster 1, H1b HIST1H1C 0.579 histone cluster 1, H1c HIST1H1T 0.389 histone cluster 1, H1t H1F0 0.229 H1 histone family, member 0 H1FX 0.182 H1 histone family, member X NEFH 0.111 neurofilament, heavy polypeptide 200kDa H1FNT 0.105 H1 histone family, member N, testis-specific H1FOO 0.082 H1 histone family, member O, oocyte-specific SHPRH 0.079 SNF2 histone linker PHD RING helicase isoform a [Ho... SHPRH 0.079 SNF2 histone linker PHD RING helicase isoform b [Hom... CCDC71 0.068 coiled-coil domain containing 71 CHD7 0.058 chromodomain helicase DNA binding protein 7 TRDN 0.058 triadin LOC100133698 0.058 PREDICTED: hypothetical protein NOLC1 0.055 nucleolar and coiled-body phosphoprotein 1 MAPT 0.053 microtubule-associated protein tau isoform 1 NCOR2 0.053 nuclear receptor co-repressor 2 isoform 1 MARCKS 0.053 myristoylated alanine-rich protein kinase C substra... MAP4 0.053 microtubule-associated protein 4 isoform 4 MAP4 0.053 microtubule-associated protein 4 isoform 2 MAP4 0.053 microtubule-associated protein 4 isoform 1 HP1BP3 0.053 HP1-BP74 CAST 0.050 calpastatin isoform h CAST 0.050 calpastatin isoform e ZC3H18 0.047 zinc finger CCCH-type containing 18 PRG4 0.045 proteoglycan 4 isoform D PRG4 0.045 proteoglycan 4 isoform C Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.