Guide to the Human Genome
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Name: FLJ45079 Sequence: fasta or formatted (154aa) NCBI GI: 48717376
Description:

hypothetical protein LOC400624

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.1         14           1
 C cysteine            9.1         14           1
 D aspartate           1.3          2           1
 E glutamate           0.6          1           1
 F phenylalanine       1.9          3           1
 G glycine             0.0          0           0
 H histidine          18.2         28           1
 I isoleucine          4.5          7           1
 K lysine              0.6          1           1
 L leucine            11.0         17           2
 M methionine          3.2          5           1
 N asparagine          1.3          2           1
 P proline             5.8          9           1
 Q glutamine           4.5          7           2
 R arginine            1.3          2           1
 S serine              1.9          3           1
 T threonine          17.5         27           2
 V valine              3.2          5           1
 W tryptophan          0.6          1           1
 Y tyrosine            3.9          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC400624 
LOC100133173          0.174   PREDICTED: hypothetical protein 
LOC100129802          0.165   PREDICTED: hypothetical protein, partial 
LOC100288317          0.159   PREDICTED: hypothetical protein XP_002342505 
LOC100134332          0.152   PREDICTED: hypothetical protein, partial 
LOC100289649          0.143   PREDICTED: hypothetical protein XP_002342367 
LOC100133553          0.134   PREDICTED: hypothetical protein, partial 
LOC100134325          0.131   PREDICTED: hypothetical protein 
LOC100132782          0.131   PREDICTED: hypothetical protein 
LOC100132423          0.128   PREDICTED: hypothetical protein, partial 
LOC100134139          0.125   PREDICTED: hypothetical protein 
LOC100129802          0.122   PREDICTED: hypothetical protein 
LOC100131203          0.119   PREDICTED: similar to serine/threonine-protein kina...
LOC100131203          0.119   PREDICTED: similar to serine/threonine-protein kina...
LOC100133975          0.113   PREDICTED: hypothetical protein, partial 
LOC100133776          0.110   PREDICTED: similar to hCG1820441 
LOC100133450          0.110   PREDICTED: hypothetical protein, partial 
LOC100287975          0.110   PREDICTED: hypothetical protein XP_002342501, parti...
LOC100293369          0.110   PREDICTED: hypothetical protein 
LOC100133844          0.110   PREDICTED: hypothetical protein 
LOC100290974          0.110   PREDICTED: hypothetical protein XP_002346910 
LOC100132983          0.110   PREDICTED: hypothetical protein 
LOC100134395          0.107   PREDICTED: hypothetical protein, partial 
LOC100294466          0.107   PREDICTED: hypothetical protein, partial 
LOC100134060          0.104   PREDICTED: hypothetical protein 
LOC100133515          0.104   PREDICTED: hypothetical protein 
LOC100132107          0.101   PREDICTED: hypothetical protein 
LOC100134730          0.101   PREDICTED: hypothetical protein 
LOC100131203          0.101   PREDICTED: hypothetical protein 
LOC100133807          0.095   PREDICTED: similar to serine/threonine-protein kina...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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