Guide to the Human Genome
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Name: LOC100290974 Sequence: fasta or formatted (218aa) NCBI GI: 239749058
Description:

PREDICTED: hypothetical protein XP_002346910

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             1.4          3           1
 C cysteine            4.6         10           1
 D aspartate           0.0          0           0
 E glutamate           1.8          4           2
 F phenylalanine       1.8          4           1
 G glycine             1.8          4           1
 H histidine          11.0         24           1
 I isoleucine         17.0         37           1
 K lysine              0.9          2           2
 L leucine             2.3          5           1
 M methionine          8.3         18           2
 N asparagine          0.9          2           1
 P proline             1.8          4           1
 Q glutamine           1.8          4           1
 R arginine            3.7          8           1
 S serine              1.4          3           1
 T threonine           8.7         19           1
 V valine              6.4         14           1
 W tryptophan          0.5          1           1
 Y tyrosine           23.9         52           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: hypothetical protein XP_002346910 
LOC100293369          0.912   PREDICTED: hypothetical protein 
LOC100132782          0.425   PREDICTED: hypothetical protein 
LOC100129642          0.374   PREDICTED: hypothetical protein 
LOC100134060          0.370   PREDICTED: hypothetical protein 
LOC100133807          0.355   PREDICTED: similar to serine/threonine-protein kina...
LOC100132679          0.348   PREDICTED: hypothetical protein 
LOC100133515          0.346   PREDICTED: hypothetical protein 
LOC100132983          0.346   PREDICTED: hypothetical protein 
LOC100288317          0.344   PREDICTED: hypothetical protein XP_002342505 
LOC100132107          0.340   PREDICTED: hypothetical protein 
LOC100131203          0.338   PREDICTED: similar to serine/threonine-protein kina...
LOC100131203          0.338   PREDICTED: similar to serine/threonine-protein kina...
LOC100134411          0.335   PREDICTED: hypothetical protein 
LOC100131203          0.335   PREDICTED: hypothetical protein 
LOC100133450          0.333   PREDICTED: hypothetical protein, partial 
LOC100287975          0.333   PREDICTED: hypothetical protein XP_002342501, parti...
LOC100134332          0.329   PREDICTED: hypothetical protein, partial 
LOC100134325          0.323   PREDICTED: hypothetical protein 
LOC100293155          0.323   PREDICTED: hypothetical protein 
LOC100133226          0.323   PREDICTED: hypothetical protein 
LOC100129825          0.321   PREDICTED: hypothetical protein 
LOC100133173          0.321   PREDICTED: hypothetical protein 
LOC100289649          0.316   PREDICTED: hypothetical protein XP_002342367 
LOC100132016          0.312   PREDICTED: hypothetical protein 
LOC100291751          0.312   PREDICTED: hypothetical protein XP_002345809, parti...
LOC100132423          0.310   PREDICTED: hypothetical protein, partial 
LOC100134279          0.308   PREDICTED: hypothetical protein, partial 
LOC100129802          0.308   PREDICTED: hypothetical protein 
LOC100129802          0.306   PREDICTED: hypothetical protein, partial 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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