SNRPD2 30829

Name: SNRPD2	Sequence: fasta or formatted (118aa)		NCBI GI: 4759158
Description: small nuclear ribonucleoprotein D2 isoform 1		Referenced in: Capping and Splicing
Other entries for this name: alt prot [108aa] small nuclear ribonucleoprotein D2 isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 1.7 2 1 C cysteine 1.7 2 1 D aspartate 2.5 3 1 E glutamate 8.5 10 4 F phenylalanine 2.5 3 1 G glycine 5.1 6 1 H histidine 0.8 1 1 I isoleucine 3.4 4 1 K lysine 14.4 17 3 L leucine 10.2 12 2 M methionine 4.2 5 1 N asparagine 9.3 11 2 P proline 5.1 6 1 Q glutamine 2.5 3 1 R arginine 5.9 7 1 S serine 6.8 8 1 T threonine 4.2 5 1 V valine 9.3 11 2 W tryptophan 0.8 1 1 Y tyrosine 0.8 1 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 small nuclear ribonucleoprotein D2 isoform 1 SNRPD2 0.911 small nuclear ribonucleoprotein D2 isoform 2 LOC119358 0.850 PREDICTED: hypothetical protein LOC119358 LOC119358 0.836 PREDICTED: similar to hCG2040270 LOC119358 0.836 PREDICTED: similar to hCG2040270 LSM3 0.103 Lsm3 protein SNRPB 0.038 small nuclear ribonucleoprotein polypeptide B/B' iso... SNRPB 0.038 small nuclear ribonucleoprotein polypeptide B/B' isof... SNRPN 0.038 small nuclear ribonucleoprotein polypeptide N SNRPN 0.038 small nuclear ribonucleoprotein polypeptide N SNRPN 0.038 small nuclear ribonucleoprotein polypeptide N SNRPN 0.038 small nuclear ribonucleoprotein polypeptide N SNRPN 0.038 small nuclear ribonucleoprotein polypeptide N PLEKHM3 0.028 pleckstrin homology domain containing, family M, me... LSM5 0.023 LSM5 homolog, U6 small nuclear RNA associated isoform... SNRPE 0.019 small nuclear ribonucleoprotein polypeptide E MAN1C1 0.014 mannosidase, alpha, class 1C, member 1 EXOC1 0.014 exocyst complex component 1 isoform 1 EXOC1 0.014 exocyst complex component 1 isoform 2 EXOC1 0.014 exocyst complex component 1 isoform 1 LOC100130109 0.014 PREDICTED: similar to hCG23490 LOC100130109 0.014 PREDICTED: similar to hCG23490 LOC100130109 0.014 PREDICTED: hypothetical protein LOC100130109 LSM5 0.014 LSM5 homolog, U6 small nuclear RNA associated isofo... LSM5 0.014 LSM5 homolog, U6 small nuclear RNA associated isofo... ASH1L 0.009 absent, small, or homeotic 1-like MCFD2 0.009 multiple coagulation factor deficiency 2 LSM8 0.009 U6 snRNA-associated Sm-like protein LSm8 NGEF 0.005 neuronal guanine nucleotide exchange factor isoform... NGEF 0.005 neuronal guanine nucleotide exchange factor isoform... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.