LOC100130109 8896

Name: LOC100130109	Sequence: fasta or formatted (92aa)		NCBI GI: 169213675
Description: PREDICTED: similar to hCG23490		Not currently referenced in the text
Other entries for this name: alt mRNA {92aa} PREDICTED: hypothetical protein LOC100130109 alt mRNA {92aa} PREDICTED: similar to hCG23490
Composition: Amino acid Percentage Count Longest homopolymer A alanine 2.2 2 1 C cysteine 1.1 1 1 D aspartate 3.3 3 2 E glutamate 5.4 5 2 F phenylalanine 2.2 2 1 G glycine 7.6 7 2 H histidine 1.1 1 1 I isoleucine 9.8 9 2 K lysine 6.5 6 1 L leucine 9.8 9 2 M methionine 5.4 5 1 N asparagine 5.4 5 1 P proline 1.1 1 1 Q glutamine 9.8 9 1 R arginine 7.6 7 1 S serine 6.5 6 1 T threonine 2.2 2 1 V valine 7.6 7 1 W tryptophan 1.1 1 1 Y tyrosine 4.3 4 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to hCG23490 LOC100130109 1.000 PREDICTED: similar to hCG23490 LOC100130109 1.000 PREDICTED: hypothetical protein LOC100130109 SNRPE 0.975 small nuclear ribonucleoprotein polypeptide E LSM5 0.113 LSM5 homolog, U6 small nuclear RNA associated isoform... LSM5 0.107 LSM5 homolog, U6 small nuclear RNA associated isofo... LSM5 0.107 LSM5 homolog, U6 small nuclear RNA associated isofo... LOC100130932 0.082 small nuclear ribonucleoprotein G-like protein [Hom... LOC100130932 0.082 PREDICTED: small nuclear ribonucleoprotein G-like p... LOC100130932 0.082 PREDICTED: small nuclear ribonucleoprotein G-like p... SNRPG 0.075 small nuclear ribonucleoprotein polypeptide G LOC100132425 0.057 PREDICTED: similar to small nuclear ribonucleoprote... LSM7 0.050 U6 snRNA-associated Sm-like protein LSm7 LSM8 0.044 U6 snRNA-associated Sm-like protein LSm8 SNRPB 0.038 small nuclear ribonucleoprotein polypeptide B/B' iso... SNRPB 0.038 small nuclear ribonucleoprotein polypeptide B/B' isof... SNRPN 0.038 small nuclear ribonucleoprotein polypeptide N SNRPN 0.038 small nuclear ribonucleoprotein polypeptide N SNRPN 0.038 small nuclear ribonucleoprotein polypeptide N SNRPN 0.038 small nuclear ribonucleoprotein polypeptide N SNRPN 0.038 small nuclear ribonucleoprotein polypeptide N SNRPD2 0.019 small nuclear ribonucleoprotein D2 isoform 2 SNRPD2 0.019 small nuclear ribonucleoprotein D2 isoform 1 SNRPF 0.019 small nuclear ribonucleoprotein polypeptide F LSM3 0.013 Lsm3 protein NCOA4 0.013 nuclear receptor coactivator 4 isoform 3 NCOA4 0.013 nuclear receptor coactivator 4 isoform 3 NCOA4 0.013 nuclear receptor coactivator 4 isoform 3 NCOA4 0.013 nuclear receptor coactivator 4 isoform 2 NCOA4 0.013 nuclear receptor coactivator 4 isoform 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.