LOC119358 9603

Name: LOC119358	Sequence: fasta or formatted (117aa)		NCBI GI: 17471847
Description: PREDICTED: hypothetical protein LOC119358		Referenced in: Capping and Splicing
Other entries for this name: alt prot [117aa] PREDICTED: similar to hCG2040270 alt prot [117aa] PREDICTED: similar to hCG2040270
Composition: Amino acid Percentage Count Longest homopolymer A alanine 1.7 2 1 C cysteine 2.6 3 1 D aspartate 1.7 2 1 E glutamate 8.5 10 4 F phenylalanine 2.6 3 1 G glycine 4.3 5 1 H histidine 4.3 5 1 I isoleucine 3.4 4 1 K lysine 12.0 14 2 L leucine 11.1 13 2 M methionine 3.4 4 1 N asparagine 8.5 10 2 P proline 4.3 5 1 Q glutamine 2.6 3 1 R arginine 4.3 5 1 S serine 7.7 9 1 T threonine 6.0 7 1 V valine 9.4 11 2 W tryptophan 0.9 1 1 Y tyrosine 0.9 1 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: hypothetical protein LOC119358 LOC119358 0.986 PREDICTED: similar to hCG2040270 LOC119358 0.986 PREDICTED: similar to hCG2040270 SNRPD2 0.846 small nuclear ribonucleoprotein D2 isoform 1 SNRPD2 0.776 small nuclear ribonucleoprotein D2 isoform 2 LSM3 0.051 Lsm3 protein RNF216 0.014 ring finger protein 216 isoform b RNF216 0.014 ring finger protein 216 isoform a LOC100291947 0.009 PREDICTED: hypothetical protein XP_002345753 MRVI1 0.009 JAW1-related protein isoform a MRVI1 0.009 JAW1-related protein isoform c MRVI1 0.009 JAW1-related protein isoform b MRVI1 0.009 JAW1-related protein isoform b PCM1 0.005 pericentriolar material 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.