LOC119358 36793

Name: LOC119358	Sequence: fasta or formatted (117aa)		NCBI GI: 89033538
Description: PREDICTED: similar to hCG2040270		Referenced in: Capping and Splicing
Other entries for this name: alt mRNA [117aa] PREDICTED: similar to hCG2040270 alt prot [117aa] PREDICTED: hypothetical protein LOC119358
Composition: Amino acid Percentage Count Longest homopolymer A alanine 1.7 2 1 C cysteine 2.6 3 1 D aspartate 1.7 2 1 E glutamate 8.5 10 4 F phenylalanine 2.6 3 1 G glycine 4.3 5 1 H histidine 4.3 5 1 I isoleucine 3.4 4 1 K lysine 12.0 14 2 L leucine 11.1 13 2 M methionine 3.4 4 1 N asparagine 8.5 10 2 P proline 3.4 4 1 Q glutamine 3.4 4 1 R arginine 4.3 5 1 S serine 7.7 9 1 T threonine 6.0 7 1 V valine 9.4 11 2 W tryptophan 0.9 1 1 Y tyrosine 0.9 1 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to hCG2040270 LOC119358 1.000 PREDICTED: similar to hCG2040270 LOC119358 0.986 PREDICTED: hypothetical protein LOC119358 SNRPD2 0.832 small nuclear ribonucleoprotein D2 isoform 1 SNRPD2 0.757 small nuclear ribonucleoprotein D2 isoform 2 LSM3 0.047 Lsm3 protein GCC2 0.014 GRIP and coiled-coil domain-containing 2 RNF216 0.014 ring finger protein 216 isoform b RNF216 0.014 ring finger protein 216 isoform a KNTC1 0.009 Rough Deal homolog, centromere/kinetochore protein [H... LOC100291947 0.009 PREDICTED: hypothetical protein XP_002345753 YSK4 0.005 Yeast Sps1/Ste20-related kinase 4 isoform 2 ZNF532 0.005 zinc finger protein 532 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.