Guide to the Human Genome
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Name: PLEKHM3 Sequence: fasta or formatted (761aa) NCBI GI: 122937347
Description:

pleckstrin homology domain containing, family M, member 3

Referenced in:

Inositol Pathways

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.9         45           2
 C cysteine            2.9         22           1
 D aspartate           4.9         37           2
 E glutamate           6.7         51           2
 F phenylalanine       4.1         31           2
 G glycine             4.5         34           2
 H histidine           2.5         19           2
 I isoleucine          3.7         28           1
 K lysine              5.7         43           2
 L leucine            10.9         83           2
 M methionine          1.8         14           1
 N asparagine          4.7         36           2
 P proline             4.2         32           2
 Q glutamine           7.5         57           7
 R arginine            5.5         42           3
 S serine              8.4         64           2
 T threonine           4.9         37           2
 V valine              5.9         45           2
 W tryptophan          1.6         12           1
 Y tyrosine            3.8         29           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   pleckstrin homology domain containing, family M, me... 
PLEKHM1               0.157   pleckstrin homology domain containing, family M (wit...
LOC100291232          0.144   PREDICTED: hypothetical protein XP_002347841 
DEF8                  0.100   differentially expressed in FDCP 8 isoform 1 
LOC100293478          0.097   PREDICTED: similar to pleckstrin homology domain co...
C13orf18              0.089   hypothetical protein LOC80183 
KIAA0226              0.082   hypothetical protein LOC9711 isoform 1 
KIAA0226              0.082   hypothetical protein LOC9711 isoform 2 
RASA1                 0.018   RAS p21 protein activator 1 isoform 1 
RASA1                 0.018   RAS p21 protein activator 1 isoform 2 
DAPP1                 0.015   dual adaptor of phosphotyrosine and 3-phosphoinosit...
NFAT5                 0.010   nuclear factor of activated T-cells 5 isoform a [Hom...
NFAT5                 0.010   nuclear factor of activated T-cells 5 isoform c [Homo...
NFAT5                 0.010   nuclear factor of activated T-cells 5 isoform d [Ho...
NFAT5                 0.010   nuclear factor of activated T-cells 5 isoform b [Ho...
NFAT5                 0.010   nuclear factor of activated T-cells 5 isoform a [Hom...
MYO10                 0.007   myosin X 
FARP1                 0.007   FERM, RhoGEF, and pleckstrin domain protein 1 isoform...
SKAP2                 0.007   src kinase associated phosphoprotein 2 
KDM5C                 0.006   jumonji, AT rich interactive domain 1C isoform 2 [H...
KDM5C                 0.006   jumonji, AT rich interactive domain 1C isoform 1 [H...
PHF21A                0.005   BRAF35/HDAC2 complex isoform b 
PHF21A                0.005   BRAF35/HDAC2 complex isoform a 
SKAP1                 0.005   src kinase associated phosphoprotein 1 isoform 2 [H...
SKAP1                 0.005   src kinase associated phosphoprotein 1 isoform 1 [H...
PHF21B                0.005   PHD finger protein 21B isoform 2 
PHF21B                0.005   PHD finger protein 21B isoform 1 
FARP2                 0.005   FERM, RhoGEF and pleckstrin domain protein 2 
SNRPD2                0.004   small nuclear ribonucleoprotein D2 isoform 1 
PATZ1                 0.004   POZ (BTB) and AT hook containing zinc finger 1 long ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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