SNRPE 29485

Name: SNRPE	Sequence: fasta or formatted (92aa)		NCBI GI: 4507129
Description: small nuclear ribonucleoprotein polypeptide E		Referenced in: Capping and Splicing
Composition: Amino acid Percentage Count Longest homopolymer A alanine 2.2 2 1 C cysteine 1.1 1 1 D aspartate 4.3 4 2 E glutamate 5.4 5 2 F phenylalanine 2.2 2 1 G glycine 6.5 6 1 H histidine 1.1 1 1 I isoleucine 9.8 9 2 K lysine 6.5 6 1 L leucine 9.8 9 2 M methionine 5.4 5 1 N asparagine 6.5 6 1 P proline 1.1 1 1 Q glutamine 9.8 9 1 R arginine 7.6 7 1 S serine 5.4 5 1 T threonine 2.2 2 1 V valine 7.6 7 1 W tryptophan 1.1 1 1 Y tyrosine 4.3 4 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 small nuclear ribonucleoprotein polypeptide E LOC100130109 0.969 PREDICTED: similar to hCG23490 LOC100130109 0.969 PREDICTED: similar to hCG23490 LOC100130109 0.969 PREDICTED: hypothetical protein LOC100130109 LSM5 0.119 LSM5 homolog, U6 small nuclear RNA associated isoform... LSM5 0.106 LSM5 homolog, U6 small nuclear RNA associated isofo... LSM5 0.106 LSM5 homolog, U6 small nuclear RNA associated isofo... LOC100130932 0.087 small nuclear ribonucleoprotein G-like protein [Hom... LOC100130932 0.087 PREDICTED: small nuclear ribonucleoprotein G-like p... LOC100130932 0.087 PREDICTED: small nuclear ribonucleoprotein G-like p... SNRPG 0.081 small nuclear ribonucleoprotein polypeptide G LSM8 0.062 U6 snRNA-associated Sm-like protein LSm8 LOC100132425 0.056 PREDICTED: similar to small nuclear ribonucleoprote... LSM7 0.050 U6 snRNA-associated Sm-like protein LSm7 SNRPB 0.044 small nuclear ribonucleoprotein polypeptide B/B' iso... SNRPB 0.044 small nuclear ribonucleoprotein polypeptide B/B' isof... SNRPN 0.044 small nuclear ribonucleoprotein polypeptide N SNRPN 0.044 small nuclear ribonucleoprotein polypeptide N SNRPN 0.044 small nuclear ribonucleoprotein polypeptide N SNRPN 0.044 small nuclear ribonucleoprotein polypeptide N SNRPN 0.044 small nuclear ribonucleoprotein polypeptide N SNRPD2 0.025 small nuclear ribonucleoprotein D2 isoform 2 SNRPD2 0.025 small nuclear ribonucleoprotein D2 isoform 1 LSM3 0.025 Lsm3 protein SNRPF 0.019 small nuclear ribonucleoprotein polypeptide F LOC100133224 0.013 PREDICTED: similar to hCG2041320 LOC100133224 0.013 PREDICTED: similar to hCG2041320 LOC100133224 0.013 PREDICTED: similar to hCG2041320 NCOA4 0.006 nuclear receptor coactivator 4 isoform 3 NCOA4 0.006 nuclear receptor coactivator 4 isoform 3 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.