Guide to the Human Genome
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Name: ASH1L Sequence: fasta or formatted (2964aa) NCBI GI: 110349788
Description:

absent, small, or homeotic 1-like

Referenced in:

Histones, Related Proteins, and Modifying Enzymes
PHD Finger Proteins
Helix-Loop-Helix Transcription Factors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.8        142           3
 C cysteine            2.1         63           2
 D aspartate           4.6        136           3
 E glutamate           7.0        207           4
 F phenylalanine       2.7         79           2
 G glycine             5.2        155           2
 H histidine           3.1         91           2
 I isoleucine          4.4        131           2
 K lysine              9.7        288           3
 L leucine             8.9        263           3
 M methionine          1.8         52           1
 N asparagine          4.2        125           2
 P proline             7.4        218           4
 Q glutamine           3.7        111           3
 R arginine            6.2        184           3
 S serine             11.3        335           3
 T threonine           5.1        150           2
 V valine              4.9        145           2
 W tryptophan          0.5         14           1
 Y tyrosine            2.5         75           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   absent, small, or homeotic 1-like 
SETBP1                0.074   SET binding protein 1 isoform a 
NSD1                  0.030   nuclear receptor binding SET domain protein 1 isofor...
NSD1                  0.030   nuclear receptor binding SET domain protein 1 isofor...
WHSC1L1               0.027   WHSC1L1 protein isoform long 
WHSC1                 0.027   Wolf-Hirschhorn syndrome candidate 1 protein isoform...
WHSC1                 0.027   Wolf-Hirschhorn syndrome candidate 1 protein isoform...
WHSC1                 0.027   Wolf-Hirschhorn syndrome candidate 1 protein isoform...
WHSC1                 0.027   Wolf-Hirschhorn syndrome candidate 1 protein isofor...
SETD2                 0.025   SET domain containing 2 
EZH2                  0.013   enhancer of zeste 2 isoform b 
EZH2                  0.013   enhancer of zeste 2 isoform a 
SUV39H2               0.012   suppressor of variegation 3-9 homolog 2 
EZH1                  0.012   enhancer of zeste homolog 1 
MLL                   0.012   myeloid/lymphoid or mixed-lineage leukemia protein [...
SUV39H1               0.012   suppressor of variegation 3-9 homolog 1 
SETMAR                0.011   SET domain and mariner transposase fusion 
EHMT2                 0.011   euchromatic histone-lysine N-methyltransferase 2 is...
EHMT2                 0.011   euchromatic histone-lysine N-methyltransferase 2 is...
SETD1B                0.010   SET domain containing 1B 
PBRM1                 0.010   polybromo 1 isoform 1 
PBRM1                 0.010   polybromo 1 isoform 4 
MLL4                  0.010   myeloid/lymphoid or mixed-lineage leukemia 4 
EHMT1                 0.010   euchromatic histone-lysine N-methyltransferase 1 is...
MLL5                  0.010   myeloid/lymphoid or mixed-lineage leukemia 5 
SETD1A                0.010   SET domain containing 1A 
MLL5                  0.010   myeloid/lymphoid or mixed-lineage leukemia 5 
PBRM1                 0.010   polybromo 1 isoform 2 
SETBP1                0.009   SET binding protein 1 isoform b 
MLL2                  0.009   myeloid/lymphoid or mixed-lineage leukemia 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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