SNRPD2 16071

Name: SNRPD2	Sequence: fasta or formatted (108aa)		NCBI GI: 237649049
Description: small nuclear ribonucleoprotein D2 isoform 2		Referenced in: Capping and Splicing
Other entries for this name: alt prot [118aa] small nuclear ribonucleoprotein D2 isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 1.9 2 1 C cysteine 1.9 2 1 D aspartate 2.8 3 1 E glutamate 8.3 9 4 F phenylalanine 2.8 3 1 G glycine 5.6 6 1 H histidine 0.9 1 1 I isoleucine 3.7 4 1 K lysine 13.9 15 3 L leucine 9.3 10 2 M methionine 3.7 4 1 N asparagine 9.3 10 2 P proline 4.6 5 1 Q glutamine 2.8 3 1 R arginine 6.5 7 1 S serine 5.6 6 1 T threonine 4.6 5 1 V valine 10.2 11 2 W tryptophan 0.9 1 1 Y tyrosine 0.9 1 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 small nuclear ribonucleoprotein D2 isoform 2 SNRPD2 1.000 small nuclear ribonucleoprotein D2 isoform 1 LOC119358 0.856 PREDICTED: hypothetical protein LOC119358 LOC119358 0.835 PREDICTED: similar to hCG2040270 LOC119358 0.835 PREDICTED: similar to hCG2040270 LSM3 0.113 Lsm3 protein SNRPB 0.041 small nuclear ribonucleoprotein polypeptide B/B' iso... SNRPB 0.041 small nuclear ribonucleoprotein polypeptide B/B' isof... SNRPN 0.041 small nuclear ribonucleoprotein polypeptide N SNRPN 0.041 small nuclear ribonucleoprotein polypeptide N SNRPN 0.041 small nuclear ribonucleoprotein polypeptide N SNRPN 0.041 small nuclear ribonucleoprotein polypeptide N SNRPN 0.041 small nuclear ribonucleoprotein polypeptide N LSM5 0.026 LSM5 homolog, U6 small nuclear RNA associated isoform... SNRPE 0.021 small nuclear ribonucleoprotein polypeptide E MAN1C1 0.015 mannosidase, alpha, class 1C, member 1 LOC100130109 0.015 PREDICTED: similar to hCG23490 LOC100130109 0.015 PREDICTED: similar to hCG23490 LOC100130109 0.015 PREDICTED: hypothetical protein LOC100130109 LSM5 0.015 LSM5 homolog, U6 small nuclear RNA associated isofo... LSM5 0.015 LSM5 homolog, U6 small nuclear RNA associated isofo... ASH1L 0.010 absent, small, or homeotic 1-like LSM8 0.010 U6 snRNA-associated Sm-like protein LSm8 ZBED4 0.005 zinc finger, BED-type containing 4 YSK4 0.005 Yeast Sps1/Ste20-related kinase 4 isoform 2 SMARCA4 0.005 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.005 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.005 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.005 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.005 SWI/SNF-related matrix-associated actin-dependent r... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.