Guide to the Human Genome
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Search of human proteins with 4759076

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|4759076 chemokine (C-C motif) ligand 20 isoform 1 [Homo
sapiens]
         (96 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|4759076 chemokine (C-C motif) ligand 20 isoform 1 [Homo sapiens]   200   2e-52
gi|194239688 chemokine (C-C motif) ligand 20 isoform 2 [Homo sap...   194   2e-50
gi|4506835 small inducible cytokine A21 precursor [Homo sapiens]       50   3e-07
gi|4759074 small inducible cytokine A16 precursor [Homo sapiens]       49   7e-07
gi|5454040 small inducible cytokine A19 precursor [Homo sapiens]       48   1e-06
gi|4506831 small inducible cytokine A18 precursor [Homo sapiens]       47   3e-06
gi|47824887 chemokine (C-C motif) ligand 4-like 1 precursor [Hom...    45   1e-05
gi|46275832 chemokine (C-C motif) ligand 4-like 2 precursor [Hom...    45   1e-05
gi|4506845 chemokine C-C motif ligand 4 isoform 1 precursor [Hom...    45   2e-05
gi|4506843 chemokine (C-C motif) ligand 3 [Homo sapiens]               44   2e-05
gi|22538816 small inducible cytokine A8 precursor [Homo sapiens]       44   3e-05
gi|5174671 chemokine (C-C motif) ligand 26 precursor [Homo sapiens]    43   6e-05
gi|4506853 chemokine (C motif) ligand 1 [Homo sapiens]                 43   6e-05
gi|4506855 chemokine (C motif) ligand 2 [Homo sapiens]                 43   6e-05
gi|22538808 small inducible cytokine A23 isoform CKbeta8 precurs...    42   1e-04
gi|22538806 small inducible cytokine A23 isoform CKbeta8-1 precu...    42   1e-04
gi|4506841 small inducible cytokine A2 precursor [Homo sapiens]        41   2e-04
gi|27477072 chemokine (C-C motif) ligand 3-like 1 precursor [Hom...    41   2e-04
gi|93589094 chemokine (C-C motif) ligand 3-like 3 precursor [Hom...    41   2e-04
gi|13435402 chemokine (C-C motif) ligand 7 precursor [Homo sapiens]    40   3e-04
gi|22538814 small inducible cytokine A5 precursor [Homo sapiens]       39   7e-04
gi|4506827 small inducible cytokine A11 precursor [Homo sapiens]       39   9e-04
gi|22165427 small inducible cytokine A24 precursor [Homo sapiens]      38   0.002
gi|10834978 interleukin 8 precursor [Homo sapiens]                     38   0.002
gi|4885587 small inducible cytokine A13 precursor [Homo sapiens]       38   0.002
gi|14589959 chemokine (C-C motif) ligand 14 isoform 2 precursor ...    37   0.004
gi|14589961 chemokine (C-C motif) ligand 14 isoform 1 precursor ...    37   0.004
gi|4506829 small inducible cytokine A17 precursor [Homo sapiens]       32   0.14 
gi|22538804 small inducible cytokine A22 precursor [Homo sapiens]      31   0.19 
gi|22538796 small inducible cytokine A25 precursor [Homo sapiens]      31   0.19 

>gi|4759076 chemokine (C-C motif) ligand 20 isoform 1 [Homo
          sapiens]
          Length = 96

 Score =  200 bits (508), Expect = 2e-52
 Identities = 96/96 (100%), Positives = 96/96 (100%)

Query: 1  MCCTKSLLLAALMSVLLLHLCGESEAASNFDCCLGYTDRILHPKFIVGFTRQLANEGCDI 60
          MCCTKSLLLAALMSVLLLHLCGESEAASNFDCCLGYTDRILHPKFIVGFTRQLANEGCDI
Sbjct: 1  MCCTKSLLLAALMSVLLLHLCGESEAASNFDCCLGYTDRILHPKFIVGFTRQLANEGCDI 60

Query: 61 NAIIFHTKKKLSVCANPKQTWVKYIVRLLSKKVKNM 96
          NAIIFHTKKKLSVCANPKQTWVKYIVRLLSKKVKNM
Sbjct: 61 NAIIFHTKKKLSVCANPKQTWVKYIVRLLSKKVKNM 96


>gi|194239688 chemokine (C-C motif) ligand 20 isoform 2 [Homo
          sapiens]
          Length = 95

 Score =  194 bits (492), Expect = 2e-50
 Identities = 95/96 (98%), Positives = 95/96 (98%), Gaps = 1/96 (1%)

Query: 1  MCCTKSLLLAALMSVLLLHLCGESEAASNFDCCLGYTDRILHPKFIVGFTRQLANEGCDI 60
          MCCTKSLLLAALMSVLLLHLCGESEA SNFDCCLGYTDRILHPKFIVGFTRQLANEGCDI
Sbjct: 1  MCCTKSLLLAALMSVLLLHLCGESEA-SNFDCCLGYTDRILHPKFIVGFTRQLANEGCDI 59

Query: 61 NAIIFHTKKKLSVCANPKQTWVKYIVRLLSKKVKNM 96
          NAIIFHTKKKLSVCANPKQTWVKYIVRLLSKKVKNM
Sbjct: 60 NAIIFHTKKKLSVCANPKQTWVKYIVRLLSKKVKNM 95


>gi|4506835 small inducible cytokine A21 precursor [Homo sapiens]
          Length = 134

 Score = 50.4 bits (119), Expect = 3e-07
 Identities = 23/63 (36%), Positives = 39/63 (61%), Gaps = 2/63 (3%)

Query: 31 DCCLGYTDRILHPKFIVGFTRQLANEGCDINAIIFHTKKK--LSVCANPKQTWVKYIVRL 88
          DCCL Y+ R +  K +  + +Q  + GC I AI+F  +K+    +CA+PK+ WV+ +++ 
Sbjct: 30 DCCLKYSQRKIPAKVVRSYRKQEPSLGCSIPAILFLPRKRSQAELCADPKELWVQQLMQH 89

Query: 89 LSK 91
          L K
Sbjct: 90 LDK 92


>gi|4759074 small inducible cytokine A16 precursor [Homo sapiens]
          Length = 120

 Score = 49.3 bits (116), Expect = 7e-07
 Identities = 21/56 (37%), Positives = 33/56 (58%), Gaps = 3/56 (5%)

Query: 32 CCLGYTDRILHPKFIVGFTRQLANEGCDINAIIFHTKKKLSVCANPKQTWVKYIVR 87
          CCL Y +++L  + +VG+ + L    C + AIIF TK+   VC NP   WV+  ++
Sbjct: 37 CCLKYYEKVLPRRLVVGYRKAL---NCHLPAIIFVTKRNREVCTNPNDDWVQEYIK 89


>gi|5454040 small inducible cytokine A19 precursor [Homo sapiens]
          Length = 98

 Score = 48.1 bits (113), Expect = 1e-06
 Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 7/95 (7%)

Query: 6  SLLLAALMSVLLLH----LCGESEAASNFDCCLGYTDRILHPKFIVGFTRQLANEGCDIN 61
          +LLLA  + VL       L G ++A    DCCL  T + +    +  F   L  +GC + 
Sbjct: 2  ALLLALSLLVLWTSPAPTLSGTNDAE---DCCLSVTQKPIPGYIVRNFHYLLIKDGCRVP 58

Query: 62 AIIFHTKKKLSVCANPKQTWVKYIVRLLSKKVKNM 96
          A++F T +   +CA P Q WV+ I++ L +    M
Sbjct: 59 AVVFTTLRGRQLCAPPDQPWVERIIQRLQRTSAKM 93


>gi|4506831 small inducible cytokine A18 precursor [Homo sapiens]
          Length = 89

 Score = 47.0 bits (110), Expect = 3e-06
 Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 4/83 (4%)

Query: 5  KSLLLAALMSVLLLHLCGESEAASNFD-CCLGYTDRILHPKFIVGFTRQLANEGCDINAI 63
          K L  A L+ V  + LC  ++  +N + CCL YT   +  KFIV ++    +  C    +
Sbjct: 2  KGLAAALLVLVCTMALCSCAQVGTNKELCCLVYTSWQIPQKFIVDYSE--TSPQCPKPGV 59

Query: 64 IFHTKKKLSVCANPKQTWV-KYI 85
          I  TK+   +CA+P + WV KYI
Sbjct: 60 ILLTKRGRQICADPNKKWVQKYI 82


>gi|47824887 chemokine (C-C motif) ligand 4-like 1 precursor [Homo
          sapiens]
          Length = 92

 Score = 45.4 bits (106), Expect = 1e-05
 Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 2/86 (2%)

Query: 1  MCCTKSLLLAALMSVLLLHLCGESEAASNFDCCLGYTDRILHPKFIVGFTRQLANEGCDI 60
          +C T   LL  + +   L L     +     CC  YT R L   F+V +     +  C  
Sbjct: 3  LCVTVLSLLVLVAAFCSLALSAPMGSDPPTACCFSYTARKLPRNFVVDYYE--TSSLCSQ 60

Query: 61 NAIIFHTKKKLSVCANPKQTWVKYIV 86
           A++F TK+   VCA+P ++WV+  V
Sbjct: 61 PAVVFQTKRGKQVCADPSESWVQEYV 86


>gi|46275832 chemokine (C-C motif) ligand 4-like 2 precursor [Homo
          sapiens]
          Length = 92

 Score = 45.4 bits (106), Expect = 1e-05
 Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 2/86 (2%)

Query: 1  MCCTKSLLLAALMSVLLLHLCGESEAASNFDCCLGYTDRILHPKFIVGFTRQLANEGCDI 60
          +C T   LL  + +   L L     +     CC  YT R L   F+V +     +  C  
Sbjct: 3  LCVTVLSLLVLVAAFCSLALSAPMGSDPPTACCFSYTARKLPRNFVVDYYE--TSSLCSQ 60

Query: 61 NAIIFHTKKKLSVCANPKQTWVKYIV 86
           A++F TK+   VCA+P ++WV+  V
Sbjct: 61 PAVVFQTKRGKQVCADPSESWVQEYV 86


>gi|4506845 chemokine C-C motif ligand 4 isoform 1 precursor [Homo
          sapiens]
          Length = 92

 Score = 44.7 bits (104), Expect = 2e-05
 Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 5/80 (6%)

Query: 7  LLLAALMSVLLLHLCGESEAASNFDCCLGYTDRILHPKFIVGFTRQLANEGCDINAIIFH 66
          +L+AA  S  L    G     +   CC  YT R L   F+V +     +  C   A++F 
Sbjct: 12 MLVAAFCSPALSAPMGSDPPTA---CCFSYTARKLPRNFVVDYYE--TSSLCSQPAVVFQ 66

Query: 67 TKKKLSVCANPKQTWVKYIV 86
          TK+   VCA+P ++WV+  V
Sbjct: 67 TKRSKQVCADPSESWVQEYV 86


>gi|4506843 chemokine (C-C motif) ligand 3 [Homo sapiens]
          Length = 92

 Score = 44.3 bits (103), Expect = 2e-05
 Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 9/82 (10%)

Query: 11 ALMSVLL--LHLCGESEAASNFD----CCLGYTDRILHPKFIVGFTRQLANEGCDINAII 64
          A ++VLL  + LC +  A+   D    CC  YT R +   FI  +     +  C    +I
Sbjct: 6  AALAVLLCTMALCNQFSASLAADTPTACCFSYTSRQIPQNFIADYFE--TSSQCSKPGVI 63

Query: 65 FHTKKKLSVCANPKQTWV-KYI 85
          F TK+   VCA+P + WV KY+
Sbjct: 64 FLTKRSRQVCADPSEEWVQKYV 85


>gi|22538816 small inducible cytokine A8 precursor [Homo sapiens]
          Length = 99

 Score = 43.9 bits (102), Expect = 3e-05
 Identities = 27/94 (28%), Positives = 48/94 (51%), Gaps = 8/94 (8%)

Query: 10 AALMSVLLLHLCGESEAASNFD-------CCLGYTDRILHPKFIVGFTRQLANEGCDINA 62
          AAL+ +LL+      +  +  D       CC    +R +  + +  +TR + N  C   A
Sbjct: 5  AALLCLLLMAATFSPQGLAQPDSVSIPITCCFNVINRKIPIQRLESYTR-ITNIQCPKEA 63

Query: 63 IIFHTKKKLSVCANPKQTWVKYIVRLLSKKVKNM 96
          +IF TK+   VCA+PK+ WV+  ++ L +  +N+
Sbjct: 64 VIFKTKRGKEVCADPKERWVRDSMKHLDQIFQNL 97


>gi|5174671 chemokine (C-C motif) ligand 26 precursor [Homo
          sapiens]
          Length = 94

 Score = 42.7 bits (99), Expect = 6e-05
 Identities = 27/86 (31%), Positives = 47/86 (54%), Gaps = 8/86 (9%)

Query: 6  SLLLAALMSVLLLHLCGESEAASNFD--CCLGYTDRILHPKFIVGFTRQLANEGCDINAI 63
          ++LLA+L+S   LHL G +   S+    CC  Y+ + L   ++  +  +  +  C   A+
Sbjct: 9  AVLLASLLS---LHL-GTATRGSDISKTCCFQYSHKPLPWTWVRSY--EFTSNSCSQRAV 62

Query: 64 IFHTKKKLSVCANPKQTWVKYIVRLL 89
          IF TK+   VC +P++ WV+  + LL
Sbjct: 63 IFTTKRGKKVCTHPRKKWVQKYISLL 88


>gi|4506853 chemokine (C motif) ligand 1 [Homo sapiens]
          Length = 114

 Score = 42.7 bits (99), Expect = 6e-05
 Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 7/89 (7%)

Query: 7  LLLAALMSVLLLHLC---GESEAASNFDCCLGYTDRILHPKFIVGFTRQLANEGCDINAI 63
          LL+ AL+ +  L      G     S+   C+  T + L    I  +T     EG  + A+
Sbjct: 3  LLILALLGICSLTAYIVEGVGSEVSDKRTCVSLTTQRLPVSRIKTYT---ITEG-SLRAV 58

Query: 64 IFHTKKKLSVCANPKQTWVKYIVRLLSKK 92
          IF TK+ L VCA+P+ TWV+ +VR + +K
Sbjct: 59 IFITKRGLKVCADPQATWVRDVVRSMDRK 87


>gi|4506855 chemokine (C motif) ligand 2 [Homo sapiens]
          Length = 114

 Score = 42.7 bits (99), Expect = 6e-05
 Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 7/89 (7%)

Query: 7  LLLAALMSVLLLHLC---GESEAASNFDCCLGYTDRILHPKFIVGFTRQLANEGCDINAI 63
          LL+ AL+ +  L      G     S+   C+  T + L    I  +T     EG  + A+
Sbjct: 3  LLILALLGICSLTAYIVEGVGSEVSHRRTCVSLTTQRLPVSRIKTYT---ITEG-SLRAV 58

Query: 64 IFHTKKKLSVCANPKQTWVKYIVRLLSKK 92
          IF TK+ L VCA+P+ TWV+ +VR + +K
Sbjct: 59 IFITKRGLKVCADPQATWVRDVVRSMDRK 87


>gi|22538808 small inducible cytokine A23 isoform CKbeta8 precursor
           [Homo sapiens]
          Length = 120

 Score = 42.0 bits (97), Expect = 1e-04
 Identities = 22/63 (34%), Positives = 31/63 (49%), Gaps = 2/63 (3%)

Query: 27  ASNFDCCLGYTDRILHPKFIVGFTRQLANEGCDINAIIFHTKKKLSVCANPKQTWVKYIV 86
           A++ DCC+ YT R +    +  +     N  C    +IF TKK    CANP    V+  V
Sbjct: 49  ATSADCCISYTPRSIPCSLLESYFE--TNSECSKPGVIFLTKKGRRFCANPSDKQVQVCV 106

Query: 87  RLL 89
           R+L
Sbjct: 107 RML 109


>gi|22538806 small inducible cytokine A23 isoform CKbeta8-1
           precursor [Homo sapiens]
          Length = 137

 Score = 42.0 bits (97), Expect = 1e-04
 Identities = 22/63 (34%), Positives = 31/63 (49%), Gaps = 2/63 (3%)

Query: 27  ASNFDCCLGYTDRILHPKFIVGFTRQLANEGCDINAIIFHTKKKLSVCANPKQTWVKYIV 86
           A++ DCC+ YT R +    +  +     N  C    +IF TKK    CANP    V+  V
Sbjct: 66  ATSADCCISYTPRSIPCSLLESYFE--TNSECSKPGVIFLTKKGRRFCANPSDKQVQVCV 123

Query: 87  RLL 89
           R+L
Sbjct: 124 RML 126


>gi|4506841 small inducible cytokine A2 precursor [Homo sapiens]
          Length = 99

 Score = 40.8 bits (94), Expect = 2e-04
 Identities = 19/63 (30%), Positives = 35/63 (55%), Gaps = 1/63 (1%)

Query: 32 CCLGYTDRILHPKFIVGFTRQLANEGCDINAIIFHTKKKLSVCANPKQTWVKYIVRLLSK 91
          CC  +T+R +  + +  + R++ +  C   A+IF T     +CA+PKQ WV+  +  L K
Sbjct: 34 CCYNFTNRKISVQRLASY-RRITSSKCPKEAVIFKTIVAKEICADPKQKWVQDSMDHLDK 92

Query: 92 KVK 94
          + +
Sbjct: 93 QTQ 95


>gi|27477072 chemokine (C-C motif) ligand 3-like 1 precursor [Homo
          sapiens]
          Length = 93

 Score = 40.8 bits (94), Expect = 2e-04
 Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 3/55 (5%)

Query: 32 CCLGYTDRILHPKFIVGFTRQLANEGCDINAIIFHTKKKLSVCANPKQTWV-KYI 85
          CC  YT R +   FI  +     +  C   ++IF TK+   VCA+P + WV KY+
Sbjct: 34 CCFSYTSRQIPQNFIADYFE--TSSQCSKPSVIFLTKRGRQVCADPSEEWVQKYV 86


>gi|93589094 chemokine (C-C motif) ligand 3-like 3 precursor [Homo
          sapiens]
          Length = 93

 Score = 40.8 bits (94), Expect = 2e-04
 Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 3/55 (5%)

Query: 32 CCLGYTDRILHPKFIVGFTRQLANEGCDINAIIFHTKKKLSVCANPKQTWV-KYI 85
          CC  YT R +   FI  +     +  C   ++IF TK+   VCA+P + WV KY+
Sbjct: 34 CCFSYTSRQIPQNFIADYFE--TSSQCSKPSVIFLTKRGRQVCADPSEEWVQKYV 86


>gi|13435402 chemokine (C-C motif) ligand 7 precursor [Homo
          sapiens]
          Length = 99

 Score = 40.4 bits (93), Expect = 3e-04
 Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 1/63 (1%)

Query: 32 CCLGYTDRILHPKFIVGFTRQLANEGCDINAIIFHTKKKLSVCANPKQTWVKYIVRLLSK 91
          CC  + ++ + PK  +   R+  +  C   A+IF TK    +CA+P Q WV+  ++ L K
Sbjct: 34 CCYRFINKKI-PKQRLESYRRTTSSHCPREAVIFKTKLDKEICADPTQKWVQDFMKHLDK 92

Query: 92 KVK 94
          K +
Sbjct: 93 KTQ 95


>gi|22538814 small inducible cytokine A5 precursor [Homo sapiens]
          Length = 91

 Score = 39.3 bits (90), Expect = 7e-04
 Identities = 26/86 (30%), Positives = 41/86 (47%), Gaps = 8/86 (9%)

Query: 10 AALMSVLLLH--LCGESEAA----SNFDCCLGYTDRILHPKFIVGFTRQLANEGCDINAI 63
          AA ++V+L+   LC  + A+        CC  Y  R L    I  +     +  C   A+
Sbjct: 5  AAALAVILIATALCAPASASPYSSDTTPCCFAYIARPLPRAHIKEYF--YTSGKCSNPAV 62

Query: 64 IFHTKKKLSVCANPKQTWVKYIVRLL 89
          +F T+K   VCANP++ WV+  +  L
Sbjct: 63 VFVTRKNRQVCANPEKKWVREYINSL 88


>gi|4506827 small inducible cytokine A11 precursor [Homo sapiens]
          Length = 97

 Score = 38.9 bits (89), Expect = 9e-04
 Identities = 18/61 (29%), Positives = 34/61 (55%), Gaps = 1/61 (1%)

Query: 32 CCLGYTDRILHPKFIVGFTRQLANEGCDINAIIFHTKKKLSVCANPKQTWVKYIVRLLSK 91
          CC    +R +  + +  + R++ +  C   A+IF TK    +CA+PK+ WV+  ++ L +
Sbjct: 32 CCFNLANRKIPLQRLESY-RRITSGKCPQKAVIFKTKLAKDICADPKKKWVQDSMKYLDQ 90

Query: 92 K 92
          K
Sbjct: 91 K 91


>gi|22165427 small inducible cytokine A24 precursor [Homo sapiens]
          Length = 119

 Score = 38.1 bits (87), Expect = 0.002
 Identities = 25/93 (26%), Positives = 43/93 (46%), Gaps = 8/93 (8%)

Query: 8  LLAALMSVLLLHLCGE-----SEAASNFDCCLGYTDRILHPKFIVGFTRQLANEGCDINA 62
          L+  + S+L L +C               CC+ +  + +    +V +  QL++    + A
Sbjct: 4  LMTIVTSLLFLGVCAHHIIPTGSVVIPSPCCMFFVSKRIPENRVVSY--QLSSRSTCLKA 61

Query: 63 -IIFHTKKKLSVCANPKQTWVKYIVRLLSKKVK 94
           +IF TKK    C +PKQ WV+  ++ L  K K
Sbjct: 62 GVIFTTKKGQQFCGDPKQEWVQRYMKNLDAKQK 94


>gi|10834978 interleukin 8 precursor [Homo sapiens]
          Length = 99

 Score = 37.7 bits (86), Expect = 0.002
 Identities = 25/91 (27%), Positives = 38/91 (41%), Gaps = 1/91 (1%)

Query: 6  SLLLAALMSVLLLHLCGESEAASNFDC-CLGYTDRILHPKFIVGFTRQLANEGCDINAII 64
          +LL A L+S  L        +A    C C+    +  HPKFI       +   C    II
Sbjct: 8  ALLAAFLISAALCEGAVLPRSAKELRCQCIKTYSKPFHPKFIKELRVIESGPHCANTEII 67

Query: 65 FHTKKKLSVCANPKQTWVKYIVRLLSKKVKN 95
                  +C +PK+ WV+ +V    K+ +N
Sbjct: 68 VKLSDGRELCLDPKENWVQRVVEKFLKRAEN 98


>gi|4885587 small inducible cytokine A13 precursor [Homo sapiens]
          Length = 98

 Score = 37.7 bits (86), Expect = 0.002
 Identities = 16/65 (24%), Positives = 33/65 (50%), Gaps = 2/65 (3%)

Query: 32 CCLGYTDRILHPKFIVGFTRQLANEGCDINAIIFHTKKKLSVCANPKQTWVKYIVRLLSK 91
          CC  ++ + +  + +  +   +    C   A+IF TK    +CA+PK+ WV+  ++ L +
Sbjct: 34 CCFTFSSKKISLQRLKSYV--ITTSRCPQKAVIFRTKLGKEICADPKEKWVQNYMKHLGR 91

Query: 92 KVKNM 96
          K   +
Sbjct: 92 KAHTL 96


>gi|14589959 chemokine (C-C motif) ligand 14 isoform 2 precursor
           [Homo sapiens]
          Length = 109

 Score = 36.6 bits (83), Expect = 0.004
 Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 2/57 (3%)

Query: 31  DCCLGYTDRILHPKFIVGFTRQLANEGCDINAIIFHTKKKLSVCANPKQTWVKYIVR 87
           +CC  YT   +  + I+ +     N  C    I+F TK+  SVC NP   WV+  ++
Sbjct: 50  ECCFTYTTYKIPRQRIMDYYE--TNSQCSKPGIVFITKRGHSVCTNPSDKWVQDYIK 104


>gi|14589961 chemokine (C-C motif) ligand 14 isoform 1 precursor
          [Homo sapiens]
          Length = 93

 Score = 36.6 bits (83), Expect = 0.004
 Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 2/57 (3%)

Query: 31 DCCLGYTDRILHPKFIVGFTRQLANEGCDINAIIFHTKKKLSVCANPKQTWVKYIVR 87
          +CC  YT   +  + I+ +     N  C    I+F TK+  SVC NP   WV+  ++
Sbjct: 34 ECCFTYTTYKIPRQRIMDYYE--TNSQCSKPGIVFITKRGHSVCTNPSDKWVQDYIK 88


>gi|4506829 small inducible cytokine A17 precursor [Homo sapiens]
          Length = 94

 Score = 31.6 bits (70), Expect = 0.14
 Identities = 21/82 (25%), Positives = 37/82 (45%), Gaps = 2/82 (2%)

Query: 8  LLAALMSVLLLHLCGESEAASNFDCCLGYTDRILHPKFIVGFTRQLANEGCDINAIIFHT 67
          L+  L+   L H+          +CCL Y    +  + +   T    +E C  +AI+F T
Sbjct: 9  LVTLLLGASLQHIHAARGTNVGRECCLEYFKGAIPLRKLK--TWYQTSEDCSRDAIVFVT 66

Query: 68 KKKLSVCANPKQTWVKYIVRLL 89
           +  ++C++P    VK  V+ L
Sbjct: 67 VQGRAICSDPNNKRVKNAVKYL 88


>gi|22538804 small inducible cytokine A22 precursor [Homo sapiens]
          Length = 93

 Score = 31.2 bits (69), Expect = 0.19
 Identities = 20/89 (22%), Positives = 39/89 (43%), Gaps = 5/89 (5%)

Query: 6  SLLLAALMSVLLLHLCGESEAASNFD---CCLGYTDRILHPKFIVGFTRQLANEGCDINA 62
          +LL+  ++  + L         +N +   CC  Y    L  + +  F     ++ C    
Sbjct: 7  ALLVVLVLLAVALQATEAGPYGANMEDSVCCRDYVRYRLPLRVVKHF--YWTSDSCPRPG 64

Query: 63 IIFHTKKKLSVCANPKQTWVKYIVRLLSK 91
          ++  T +   +CA+P+  WVK I+  LS+
Sbjct: 65 VVLLTFRDKEICADPRVPWVKMILNKLSQ 93


>gi|22538796 small inducible cytokine A25 precursor [Homo sapiens]
          Length = 150

 Score = 31.2 bits (69), Expect = 0.19
 Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 3/67 (4%)

Query: 31 DCCLGYTDRILHPKFIVGFTRQL--ANEGCDINAIIFHTKKK-LSVCANPKQTWVKYIVR 87
          DCCL Y   I        +T ++   +  C++ A IF+  K+   VC NPK   V+  ++
Sbjct: 29 DCCLAYHYPIGWAVLRRAWTYRIQEVSGSCNLPAAIFYLPKRHRKVCGNPKSREVQRAMK 88

Query: 88 LLSKKVK 94
          LL  + K
Sbjct: 89 LLDARNK 95


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.328    0.138    0.436 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,269,205
Number of Sequences: 37866
Number of extensions: 115158
Number of successful extensions: 309
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 262
Number of HSP's gapped (non-prelim): 39
length of query: 96
length of database: 18,247,518
effective HSP length: 67
effective length of query: 29
effective length of database: 15,710,496
effective search space: 455604384
effective search space used: 455604384
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 55 (25.8 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
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