SEC13 12551

Name: SEC13	Sequence: fasta or formatted (308aa)		NCBI GI: 210032390
Description: SEC13 protein isoform 2		Referenced in: ER, Golgi, and the Secretory Pathway
Other entries for this name: alt prot [322aa] SEC13 protein isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.5 23 1 C cysteine 2.9 9 1 D aspartate 6.8 21 2 E glutamate 5.2 16 3 F phenylalanine 1.3 4 1 G glycine 8.8 27 2 H histidine 3.9 12 1 I isoleucine 6.5 20 2 K lysine 5.2 16 2 L leucine 5.5 17 2 M methionine 1.0 3 1 N asparagine 4.9 15 2 P proline 3.2 10 1 Q glutamine 4.2 13 2 R arginine 2.9 9 1 S serine 10.4 32 2 T threonine 4.2 13 1 V valine 7.8 24 2 W tryptophan 5.5 17 1 Y tyrosine 2.3 7 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 SEC13 protein isoform 2 SEC13 1.000 SEC13 protein isoform 1 SEH1L 0.199 sec13-like protein isoform 1 SEH1L 0.199 sec13-like protein isoform 2 CIAO1 0.123 WD repeat domain 39 PAFAH1B1 0.068 platelet-activating factor acetylhydrolase, isoform I... SNRNP40 0.062 WD repeat domain 57 (U5 snRNP specific) APAF1 0.062 apoptotic peptidase activating factor 1 isoform d [H... APAF1 0.062 apoptotic peptidase activating factor 1 isoform b [Ho... TBL1Y 0.060 transducin beta-like 1Y TBL1Y 0.060 transducin beta-like 1Y TBL1Y 0.060 transducin beta-like 1Y APAF1 0.055 apoptotic peptidase activating factor 1 isoform c [H... APAF1 0.055 apoptotic peptidase activating factor 1 isoform a [Ho... TAF5L 0.054 PCAF associated factor 65 beta isoform a TBL3 0.052 transducin beta-like 3 RBBP7 0.052 retinoblastoma binding protein 7 WDR5B 0.047 WD repeat domain 5B THOC3 0.046 THO complex 3 GRWD1 0.044 glutamate-rich WD repeat containing 1 EML4 0.044 echinoderm microtubule associated protein like 4 is... EML4 0.044 echinoderm microtubule associated protein like 4 iso... TBL1XR1 0.044 transducin (beta)-like 1 X-linked receptor 1 WDR33 0.044 WD repeat domain 33 isoform 1 LOC653888 0.043 PREDICTED: similar to actin related protein 2/3 comp... ARPC1B 0.043 actin related protein 2/3 complex subunit 1B TBL1X 0.043 transducin beta-like 1X isoform b TBL1X 0.043 transducin beta-like 1X isoform b TBL1X 0.043 transducin beta-like 1X isoform a TBL1X 0.043 transducin beta-like 1X isoform a Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.