SEC13 26377

Name: SEC13	Sequence: fasta or formatted (322aa)		NCBI GI: 34335134
Description: SEC13 protein isoform 1		Referenced in: ER, Golgi, and the Secretory Pathway
Other entries for this name: alt prot [308aa] SEC13 protein isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.1 23 1 C cysteine 2.8 9 1 D aspartate 7.1 23 2 E glutamate 5.3 17 3 F phenylalanine 1.2 4 1 G glycine 8.4 27 2 H histidine 4.0 13 1 I isoleucine 6.5 21 2 K lysine 5.0 16 2 L leucine 5.3 17 2 M methionine 1.2 4 1 N asparagine 5.0 16 2 P proline 3.1 10 1 Q glutamine 4.0 13 2 R arginine 2.8 9 1 S serine 10.6 34 2 T threonine 4.7 15 1 V valine 8.4 27 2 W tryptophan 5.3 17 1 Y tyrosine 2.2 7 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 SEC13 protein isoform 1 SEC13 0.959 SEC13 protein isoform 2 SEH1L 0.203 sec13-like protein isoform 1 SEH1L 0.203 sec13-like protein isoform 2 CIAO1 0.118 WD repeat domain 39 PAFAH1B1 0.071 platelet-activating factor acetylhydrolase, isoform I... APAF1 0.067 apoptotic peptidase activating factor 1 isoform d [H... APAF1 0.067 apoptotic peptidase activating factor 1 isoform b [Ho... SNRNP40 0.064 WD repeat domain 57 (U5 snRNP specific) APAF1 0.061 apoptotic peptidase activating factor 1 isoform c [H... APAF1 0.061 apoptotic peptidase activating factor 1 isoform a [Ho... TBL1Y 0.057 transducin beta-like 1Y TBL1Y 0.057 transducin beta-like 1Y TBL1Y 0.057 transducin beta-like 1Y TBL3 0.053 transducin beta-like 3 TAF5L 0.051 PCAF associated factor 65 beta isoform a WDR33 0.048 WD repeat domain 33 isoform 1 THOC3 0.047 THO complex 3 WDR5B 0.045 WD repeat domain 5B WDR51B 0.044 WD repeat domain 51B TEP1 0.042 telomerase-associated protein 1 GRWD1 0.042 glutamate-rich WD repeat containing 1 EML4 0.042 echinoderm microtubule associated protein like 4 is... EML4 0.042 echinoderm microtubule associated protein like 4 iso... TBL1XR1 0.042 transducin (beta)-like 1 X-linked receptor 1 LOC653888 0.041 PREDICTED: similar to actin related protein 2/3 comp... ARPC1B 0.041 actin related protein 2/3 complex subunit 1B SPAG16 0.041 sperm associated antigen 16 isoform 1 RBBP4 0.039 retinoblastoma binding protein 4 isoform c RBBP4 0.039 retinoblastoma binding protein 4 isoform b Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.