Guide to the Human Genome
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Name: WDR26 Sequence: fasta or formatted (498aa) NCBI GI: 169403944
Description:

WD repeat domain 26 isoform b

Referenced in:

WD Repeat Proteins

Other entries for this name:
alt prot [514aa] WD repeat domain 26 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.4         22           1
 C cysteine            3.2         16           1
 D aspartate           7.2         36           2
 E glutamate           6.0         30           3
 F phenylalanine       2.6         13           1
 G glycine             6.0         30           2
 H histidine           4.2         21           1
 I isoleucine          3.8         19           2
 K lysine              4.8         24           1
 L leucine            11.6         58           3
 M methionine          2.0         10           2
 N asparagine          4.2         21           2
 P proline             3.8         19           2
 Q glutamine           5.2         26           2
 R arginine            5.4         27           2
 S serine              7.2         36           2
 T threonine           6.0         30           2
 V valine              6.2         31           1
 W tryptophan          2.8         14           1
 Y tyrosine            3.0         15           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   WD repeat domain 26 isoform b 
WDR26                 0.990   WD repeat domain 26 isoform a 
WDR5                  0.075   WD repeat domain 5 
WDR5                  0.075   WD repeat domain 5 
WDR5B                 0.074   WD repeat domain 5B 
CIAO1                 0.061   WD repeat domain 39 
SNRNP40               0.056   WD repeat domain 57 (U5 snRNP specific) 
NLE1                  0.056   Notchless gene homolog isoform a 
WDR17                 0.052   WD repeat domain 17 isoform 2 
WDR17                 0.052   WD repeat domain 17 isoform 1 
TAF5                  0.049   TBP-associated factor 5 
WDR69                 0.042   WD repeat domain 69 
WDR38                 0.040   WD repeat domain 38 
CORO6                 0.040   coronin 6 
APAF1                 0.040   apoptotic peptidase activating factor 1 isoform d [H...
APAF1                 0.040   apoptotic peptidase activating factor 1 isoform b [Ho...
FBXW7                 0.039   F-box and WD repeat domain containing 7 isoform 3 [H...
FBXW7                 0.039   F-box and WD repeat domain containing 7 isoform 1 [H...
FBXW7                 0.039   F-box and WD repeat domain containing 7 isoform 2 [H...
CORO1C                0.039   coronin, actin binding protein, 1C isoform 1 
WDR51A                0.039   WD repeat domain 51A isoform 2 
WDR51A                0.039   WD repeat domain 51A isoform 1 
KATNB1                0.038   katanin p80 subunit B 1 
APAF1                 0.038   apoptotic peptidase activating factor 1 isoform c [H...
APAF1                 0.038   apoptotic peptidase activating factor 1 isoform a [Ho...
ATG16L2               0.038   ATG16 autophagy related 16-like 2 
STRAP                 0.037   serine/threonine kinase receptor associated protein...
TBL1X                 0.036   transducin beta-like 1X isoform b 
TBL1X                 0.036   transducin beta-like 1X isoform b 
TBL1X                 0.036   transducin beta-like 1X isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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