Guide to the Human Genome
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Name: WDR26 Sequence: fasta or formatted (514aa) NCBI GI: 55743153
Description:

WD repeat domain 26 isoform a

Referenced in:

WD Repeat Proteins

Other entries for this name:
alt prot [498aa] WD repeat domain 26 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.5         23           1
 C cysteine            3.1         16           1
 D aspartate           7.0         36           2
 E glutamate           6.0         31           3
 F phenylalanine       2.5         13           1
 G glycine             6.2         32           2
 H histidine           4.1         21           1
 I isoleucine          4.3         22           2
 K lysine              4.7         24           1
 L leucine            11.9         61           3
 M methionine          1.9         10           2
 N asparagine          4.1         21           2
 P proline             3.7         19           2
 Q glutamine           5.3         27           2
 R arginine            5.4         28           2
 S serine              7.2         37           2
 T threonine           6.0         31           2
 V valine              6.4         33           2
 W tryptophan          2.7         14           1
 Y tyrosine            2.9         15           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   WD repeat domain 26 isoform a 
WDR26                 0.964   WD repeat domain 26 isoform b 
WDR5                  0.073   WD repeat domain 5 
WDR5                  0.073   WD repeat domain 5 
WDR5B                 0.072   WD repeat domain 5B 
CIAO1                 0.059   WD repeat domain 39 
SNRNP40               0.054   WD repeat domain 57 (U5 snRNP specific) 
NLE1                  0.054   Notchless gene homolog isoform a 
WDR17                 0.051   WD repeat domain 17 isoform 2 
WDR17                 0.051   WD repeat domain 17 isoform 1 
TAF5                  0.048   TBP-associated factor 5 
WDR69                 0.041   WD repeat domain 69 
WDR38                 0.039   WD repeat domain 38 
CORO6                 0.039   coronin 6 
APAF1                 0.039   apoptotic peptidase activating factor 1 isoform d [H...
APAF1                 0.039   apoptotic peptidase activating factor 1 isoform b [Ho...
FBXW7                 0.038   F-box and WD repeat domain containing 7 isoform 3 [H...
FBXW7                 0.038   F-box and WD repeat domain containing 7 isoform 1 [H...
FBXW7                 0.038   F-box and WD repeat domain containing 7 isoform 2 [H...
CORO1C                0.038   coronin, actin binding protein, 1C isoform 1 
WDR51A                0.038   WD repeat domain 51A isoform 2 
WDR51A                0.038   WD repeat domain 51A isoform 1 
KATNB1                0.037   katanin p80 subunit B 1 
APAF1                 0.037   apoptotic peptidase activating factor 1 isoform c [H...
APAF1                 0.037   apoptotic peptidase activating factor 1 isoform a [Ho...
ATG16L2               0.037   ATG16 autophagy related 16-like 2 
STRAP                 0.036   serine/threonine kinase receptor associated protein...
TBL1X                 0.035   transducin beta-like 1X isoform b 
TBL1X                 0.035   transducin beta-like 1X isoform b 
TBL1X                 0.035   transducin beta-like 1X isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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