Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 4757898
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4757898 calbindin 3 [Homo sapiens]
(79 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4757898 calbindin 3 [Homo sapiens] 157 2e-39
gi|5454032 S100 calcium binding protein A1 [Homo sapiens] 62 8e-11
gi|5174663 S100 calcium binding protein P [Homo sapiens] 57 4e-09
gi|150010678 S100 calcium binding protein Z [Homo sapiens] 56 7e-09
gi|57864582 hornerin [Homo sapiens] 54 2e-08
gi|171916097 repetin [Homo sapiens] 53 6e-08
gi|5454034 S100 calcium-binding protein, beta [Homo sapiens] 52 8e-08
gi|9845516 S100 calcium-binding protein A4 [Homo sapiens] 52 8e-08
gi|4506765 S100 calcium-binding protein A4 [Homo sapiens] 52 8e-08
gi|7706635 cornulin [Homo sapiens] 52 1e-07
gi|4506773 S100 calcium-binding protein A9 [Homo sapiens] 50 3e-07
gi|5032059 S100 calcium-binding protein A12 [Homo sapiens] 50 3e-07
gi|66737374 S100 calcium binding protein A13 [Homo sapiens] 50 3e-07
gi|66737372 S100 calcium binding protein A13 [Homo sapiens] 50 3e-07
gi|66737370 S100 calcium binding protein A13 [Homo sapiens] 50 3e-07
gi|66737368 S100 calcium binding protein A13 [Homo sapiens] 50 3e-07
gi|5174659 S100 calcium binding protein A13 [Homo sapiens] 50 3e-07
gi|60097902 filaggrin [Homo sapiens] 50 5e-07
gi|5032057 S100 calcium binding protein A11 [Homo sapiens] 50 5e-07
gi|4506767 S100 calcium binding protein A5 [Homo sapiens] 50 5e-07
gi|148746195 trichohyalin [Homo sapiens] 48 1e-06
gi|7657532 S100 calcium-binding protein A6 [Homo sapiens] 48 2e-06
gi|21614544 S100 calcium-binding protein A8 [Homo sapiens] 47 3e-06
gi|62122917 filaggrin family member 2 [Homo sapiens] 47 3e-06
gi|5174661 S100 calcium binding protein A2 [Homo sapiens] 47 3e-06
gi|4506761 S100 calcium binding protein A10 [Homo sapiens] 46 7e-06
gi|115298657 S100 calcium binding protein A7 [Homo sapiens] 43 5e-05
gi|4507615 troponin C, slow [Homo sapiens] 41 2e-04
gi|55749678 ninein-like [Homo sapiens] 40 4e-04
gi|21624641 calcium binding protein 4 [Homo sapiens] 38 0.002
>gi|4757898 calbindin 3 [Homo sapiens]
Length = 79
Score = 157 bits (397), Expect = 2e-39
Identities = 79/79 (100%), Positives = 79/79 (100%)
Query: 1 MSTKKSPEELKRIFEKYAAKEGDPDQLSKDELKLLIQAEFPSLLKGPNTLDDLFQELDKN 60
MSTKKSPEELKRIFEKYAAKEGDPDQLSKDELKLLIQAEFPSLLKGPNTLDDLFQELDKN
Sbjct: 1 MSTKKSPEELKRIFEKYAAKEGDPDQLSKDELKLLIQAEFPSLLKGPNTLDDLFQELDKN 60
Query: 61 GDGEVSFEEFQVLVKKISQ 79
GDGEVSFEEFQVLVKKISQ
Sbjct: 61 GDGEVSFEEFQVLVKKISQ 79
>gi|5454032 S100 calcium binding protein A1 [Homo sapiens]
Length = 94
Score = 62.4 bits (150), Expect = 8e-11
Identities = 33/74 (44%), Positives = 47/74 (63%), Gaps = 3/74 (4%)
Query: 8 EELKRIFEKYAAKEGDPDQLSKDELKLLIQAEFPSLL---KGPNTLDDLFQELDKNGDGE 64
E L +F ++ KEGD +LSK ELK L+Q E L K + +D + +ELD+NGDGE
Sbjct: 10 ETLINVFHAHSGKEGDKYKLSKKELKELLQTELSGFLDAQKDVDAVDKVMKELDENGDGE 69
Query: 65 VSFEEFQVLVKKIS 78
V F+E+ VLV ++
Sbjct: 70 VDFQEYVVLVAALT 83
>gi|5174663 S100 calcium binding protein P [Homo sapiens]
Length = 95
Score = 56.6 bits (135), Expect = 4e-09
Identities = 28/69 (40%), Positives = 41/69 (59%), Gaps = 3/69 (4%)
Query: 13 IFEKYAAKEGDPDQLSKDELKLLIQAEFPSLL---KGPNTLDDLFQELDKNGDGEVSFEE 69
+F +Y+ EG L+K ELK+L++ E P L K + +D L ++LD NGD +V F E
Sbjct: 14 VFSRYSGSEGSTQTLTKGELKVLMEKELPGFLQSGKDKDAVDKLLKDLDANGDAQVDFSE 73
Query: 70 FQVLVKKIS 78
F V V I+
Sbjct: 74 FIVFVAAIT 82
>gi|150010678 S100 calcium binding protein Z [Homo sapiens]
Length = 99
Score = 55.8 bits (133), Expect = 7e-09
Identities = 32/70 (45%), Positives = 42/70 (60%), Gaps = 3/70 (4%)
Query: 12 RIFEKYAAKEGDPDQLSKDELKLLIQ---AEFPSLLKGPNTLDDLFQELDKNGDGEVSFE 68
RIF +Y+ KE +LSK ELKLL+Q EF S K +D + Q+LD N D EV F
Sbjct: 14 RIFHRYSGKERKRFKLSKGELKLLLQRELTEFLSCQKETQLVDKIVQDLDANKDNEVDFN 73
Query: 69 EFQVLVKKIS 78
EF V+V ++
Sbjct: 74 EFVVMVAALT 83
>gi|57864582 hornerin [Homo sapiens]
Length = 2850
Score = 54.3 bits (129), Expect = 2e-08
Identities = 27/70 (38%), Positives = 46/70 (65%), Gaps = 3/70 (4%)
Query: 13 IFEKYAAKEGDPDQLSKDELKLLIQAEFPSLLKGPN---TLDDLFQELDKNGDGEVSFEE 69
+F +YA + G+ D L+K ELK L++ EF +LK PN T+D + Q LD++ + +V F E
Sbjct: 14 VFYQYATQHGEYDTLNKAELKELLENEFHQILKNPNDPDTVDIILQSLDRDHNKKVDFTE 73
Query: 70 FQVLVKKISQ 79
+ +++ K+ Q
Sbjct: 74 YLLMIFKLVQ 83
>gi|171916097 repetin [Homo sapiens]
Length = 784
Score = 52.8 bits (125), Expect = 6e-08
Identities = 28/70 (40%), Positives = 43/70 (61%), Gaps = 3/70 (4%)
Query: 13 IFEKYAAKEGDPDQLSKDELKLLIQAEFPSLLKGPN---TLDDLFQELDKNGDGEVSFEE 69
+F KYA GD L K+ELK L+ AEF +L+ PN T++ + LD++ DG + F E
Sbjct: 14 VFHKYAKGNGDCALLCKEELKQLLLAEFGDILQRPNDPETVETILNLLDQDRDGHIDFHE 73
Query: 70 FQVLVKKISQ 79
+ +LV ++ Q
Sbjct: 74 YLLLVFQLVQ 83
>gi|5454034 S100 calcium-binding protein, beta [Homo sapiens]
Length = 92
Score = 52.4 bits (124), Expect = 8e-08
Identities = 28/78 (35%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 4 KKSPEELKRIFEKYAAKEGDPDQLSKDELKLLIQAE---FPSLLKGPNTLDDLFQELDKN 60
+K+ L +F +Y+ +EGD +L K ELK LI E F +K +D + + LD +
Sbjct: 5 EKAMVALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDND 64
Query: 61 GDGEVSFEEFQVLVKKIS 78
GDGE F+EF V ++
Sbjct: 65 GDGECDFQEFMAFVAMVT 82
>gi|9845516 S100 calcium-binding protein A4 [Homo sapiens]
Length = 101
Score = 52.4 bits (124), Expect = 8e-08
Identities = 32/79 (40%), Positives = 46/79 (58%), Gaps = 5/79 (6%)
Query: 4 KKSPEELKRIFEKYAAKEGDPDQLSKDELKLLIQAEFPSLLKGPNTLDDLFQE----LDK 59
+K+ + + F KY+ KEGD +L+K ELK L+ E PS L G T + FQ+ LD
Sbjct: 6 EKALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFL-GKRTDEAAFQKLMSNLDS 64
Query: 60 NGDGEVSFEEFQVLVKKIS 78
N D EV F+E+ V + I+
Sbjct: 65 NRDNEVDFQEYCVFLSCIA 83
>gi|4506765 S100 calcium-binding protein A4 [Homo sapiens]
Length = 101
Score = 52.4 bits (124), Expect = 8e-08
Identities = 32/79 (40%), Positives = 46/79 (58%), Gaps = 5/79 (6%)
Query: 4 KKSPEELKRIFEKYAAKEGDPDQLSKDELKLLIQAEFPSLLKGPNTLDDLFQE----LDK 59
+K+ + + F KY+ KEGD +L+K ELK L+ E PS L G T + FQ+ LD
Sbjct: 6 EKALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFL-GKRTDEAAFQKLMSNLDS 64
Query: 60 NGDGEVSFEEFQVLVKKIS 78
N D EV F+E+ V + I+
Sbjct: 65 NRDNEVDFQEYCVFLSCIA 83
>gi|7706635 cornulin [Homo sapiens]
Length = 495
Score = 51.6 bits (122), Expect = 1e-07
Identities = 27/69 (39%), Positives = 45/69 (65%), Gaps = 3/69 (4%)
Query: 14 FEKYAAKEGDPDQLSKDELKLLIQAEFPSLLKGPN---TLDDLFQELDKNGDGEVSFEEF 70
F +YA EG+ L++ ELK L++ EF ++ P+ T+D++ + LD++ G V F+EF
Sbjct: 15 FRRYARTEGNCTALTRGELKRLLEQEFADVIVKPHDPATVDEVLRLLDEDHTGTVEFKEF 74
Query: 71 QVLVKKISQ 79
VLV K++Q
Sbjct: 75 LVLVFKVAQ 83
>gi|4506773 S100 calcium-binding protein A9 [Homo sapiens]
Length = 114
Score = 50.4 bits (119), Expect = 3e-07
Identities = 24/79 (30%), Positives = 48/79 (60%), Gaps = 4/79 (5%)
Query: 4 KKSPEELKRIFEKYAAKEGDPDQLSKDELKLLIQAEFPSLLKGPN----TLDDLFQELDK 59
+++ E + F +Y+ K G PD L++ E K L++ + + LK N ++ + ++LD
Sbjct: 9 ERNIETIINTFHQYSVKLGHPDTLNQGEFKELVRKDLQNFLKKENKNEKVIEHIMEDLDT 68
Query: 60 NGDGEVSFEEFQVLVKKIS 78
N D ++SFEEF +L+ +++
Sbjct: 69 NADKQLSFEEFIMLMARLT 87
>gi|5032059 S100 calcium-binding protein A12 [Homo sapiens]
Length = 92
Score = 50.4 bits (119), Expect = 3e-07
Identities = 28/70 (40%), Positives = 41/70 (58%), Gaps = 3/70 (4%)
Query: 8 EELKRIFEKYAAKEGDPDQLSKDELKLLIQAEFPSLLKG---PNTLDDLFQELDKNGDGE 64
E + IF +Y+ ++G D LSK ELK L+ E + +K +D++FQ LD N D +
Sbjct: 9 EGIVNIFHQYSVRKGHFDTLSKGELKQLLTKELANTIKNIKDKAVIDEIFQGLDANQDEQ 68
Query: 65 VSFEEFQVLV 74
V F+EF LV
Sbjct: 69 VDFQEFISLV 78
>gi|66737374 S100 calcium binding protein A13 [Homo sapiens]
Length = 98
Score = 50.4 bits (119), Expect = 3e-07
Identities = 26/76 (34%), Positives = 44/76 (57%)
Query: 4 KKSPEELKRIFEKYAAKEGDPDQLSKDELKLLIQAEFPSLLKGPNTLDDLFQELDKNGDG 63
++S E + F +A +EG D LS +E K L+ + P LLK +LD+ + LD N D
Sbjct: 10 EESIETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLKDVGSLDEKMKSLDVNQDS 69
Query: 64 EVSFEEFQVLVKKISQ 79
E+ F E+ L+ ++++
Sbjct: 70 ELKFNEYWRLIGELAK 85
>gi|66737372 S100 calcium binding protein A13 [Homo sapiens]
Length = 98
Score = 50.4 bits (119), Expect = 3e-07
Identities = 26/76 (34%), Positives = 44/76 (57%)
Query: 4 KKSPEELKRIFEKYAAKEGDPDQLSKDELKLLIQAEFPSLLKGPNTLDDLFQELDKNGDG 63
++S E + F +A +EG D LS +E K L+ + P LLK +LD+ + LD N D
Sbjct: 10 EESIETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLKDVGSLDEKMKSLDVNQDS 69
Query: 64 EVSFEEFQVLVKKISQ 79
E+ F E+ L+ ++++
Sbjct: 70 ELKFNEYWRLIGELAK 85
>gi|66737370 S100 calcium binding protein A13 [Homo sapiens]
Length = 98
Score = 50.4 bits (119), Expect = 3e-07
Identities = 26/76 (34%), Positives = 44/76 (57%)
Query: 4 KKSPEELKRIFEKYAAKEGDPDQLSKDELKLLIQAEFPSLLKGPNTLDDLFQELDKNGDG 63
++S E + F +A +EG D LS +E K L+ + P LLK +LD+ + LD N D
Sbjct: 10 EESIETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLKDVGSLDEKMKSLDVNQDS 69
Query: 64 EVSFEEFQVLVKKISQ 79
E+ F E+ L+ ++++
Sbjct: 70 ELKFNEYWRLIGELAK 85
>gi|66737368 S100 calcium binding protein A13 [Homo sapiens]
Length = 98
Score = 50.4 bits (119), Expect = 3e-07
Identities = 26/76 (34%), Positives = 44/76 (57%)
Query: 4 KKSPEELKRIFEKYAAKEGDPDQLSKDELKLLIQAEFPSLLKGPNTLDDLFQELDKNGDG 63
++S E + F +A +EG D LS +E K L+ + P LLK +LD+ + LD N D
Sbjct: 10 EESIETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLKDVGSLDEKMKSLDVNQDS 69
Query: 64 EVSFEEFQVLVKKISQ 79
E+ F E+ L+ ++++
Sbjct: 70 ELKFNEYWRLIGELAK 85
>gi|5174659 S100 calcium binding protein A13 [Homo sapiens]
Length = 98
Score = 50.4 bits (119), Expect = 3e-07
Identities = 26/76 (34%), Positives = 44/76 (57%)
Query: 4 KKSPEELKRIFEKYAAKEGDPDQLSKDELKLLIQAEFPSLLKGPNTLDDLFQELDKNGDG 63
++S E + F +A +EG D LS +E K L+ + P LLK +LD+ + LD N D
Sbjct: 10 EESIETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLKDVGSLDEKMKSLDVNQDS 69
Query: 64 EVSFEEFQVLVKKISQ 79
E+ F E+ L+ ++++
Sbjct: 70 ELKFNEYWRLIGELAK 85
>gi|60097902 filaggrin [Homo sapiens]
Length = 4061
Score = 49.7 bits (117), Expect = 5e-07
Identities = 27/70 (38%), Positives = 47/70 (67%), Gaps = 3/70 (4%)
Query: 13 IFEKYAAKEGDPDQLSKDELKLLIQAEFPSLLKGPNTLD--DLFQE-LDKNGDGEVSFEE 69
+F++Y+ K+ + D LSK ELK L++ EF +LK P+ D D+F + LD + + ++ F E
Sbjct: 14 LFKQYSKKDKNTDTLSKKELKELLEKEFRQILKNPDDPDMVDVFMDHLDIDHNKKIDFTE 73
Query: 70 FQVLVKKISQ 79
F ++V K++Q
Sbjct: 74 FLLMVFKLAQ 83
>gi|5032057 S100 calcium binding protein A11 [Homo sapiens]
Length = 105
Score = 49.7 bits (117), Expect = 5e-07
Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Query: 3 TKKSPEELKRIFEKYAAKEGDPDQLSKDELKLLIQAEFPSLLKG---PNTLDDLFQELDK 59
T++ E L +F+KYA K+G LSK E + E + K P LD + ++LD
Sbjct: 10 TERCIESLIAVFQKYAGKDGYNYTLSKTEFLSFMNTELAAFTKNQKDPGVLDRMMKKLDT 69
Query: 60 NGDGEVSFEEFQVLV 74
N DG++ F EF L+
Sbjct: 70 NSDGQLDFSEFLNLI 84
>gi|4506767 S100 calcium binding protein A5 [Homo sapiens]
Length = 110
Score = 49.7 bits (117), Expect = 5e-07
Identities = 25/61 (40%), Positives = 37/61 (60%)
Query: 14 FEKYAAKEGDPDQLSKDELKLLIQAEFPSLLKGPNTLDDLFQELDKNGDGEVSFEEFQVL 73
F KY+ +EG LS+ ELK LI+ E +++DDL + LDKN D E+ F+E+ V
Sbjct: 34 FHKYSGREGSKLTLSRKELKELIKKELCLGEMKESSIDDLMKSLDKNSDQEIDFKEYSVF 93
Query: 74 V 74
+
Sbjct: 94 L 94
>gi|148746195 trichohyalin [Homo sapiens]
Length = 1943
Score = 48.1 bits (113), Expect = 1e-06
Identities = 24/74 (32%), Positives = 46/74 (62%), Gaps = 3/74 (4%)
Query: 9 ELKRIFEKYAAKEGDPDQLSKDELKLLIQAEFPSLLKGPN---TLDDLFQELDKNGDGEV 65
++ IF +Y + + D L+K +LK L++ EF ++L+ P+ T+D + + LD + +G V
Sbjct: 10 DITEIFNQYVSHDCDGAALTKKDLKNLLEREFGAVLRRPHDPKTVDLILELLDLDSNGRV 69
Query: 66 SFEEFQVLVKKISQ 79
F EF + + K++Q
Sbjct: 70 DFNEFLLFIFKVAQ 83
>gi|7657532 S100 calcium-binding protein A6 [Homo sapiens]
Length = 90
Score = 47.8 bits (112), Expect = 2e-06
Identities = 28/62 (45%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 10 LKRIFEKYAAKEGDPDQLSKDELKLLIQAEFPSLLKGPNT-LDDLFQELDKNGDGEVSFE 68
L IF KY+ +EGD LSK ELK LIQ E K + + L ++LD+N D EV+F+
Sbjct: 12 LVAIFHKYSGREGDKHTLSKKELKELIQKELTIGSKLQDAEIARLMEDLDRNKDQEVNFQ 71
Query: 69 EF 70
E+
Sbjct: 72 EY 73
>gi|21614544 S100 calcium-binding protein A8 [Homo sapiens]
Length = 93
Score = 47.4 bits (111), Expect = 3e-06
Identities = 25/74 (33%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Query: 4 KKSPEELKRIFEKYAAKEGDPDQLSKDELKLLIQAEFPSLLKGPNTLDDLFQELDKNGDG 63
+K+ + ++ KY+ +G+ + +D+LK L++ E P ++ D F+ELD N DG
Sbjct: 6 EKALNSIIDVYHKYSLIKGNFHAVYRDDLKKLLETECPQYIRKKGA-DVWFKELDINTDG 64
Query: 64 EVSFEEFQVLVKKI 77
V+F+EF +LV K+
Sbjct: 65 AVNFQEFLILVIKM 78
>gi|62122917 filaggrin family member 2 [Homo sapiens]
Length = 2391
Score = 47.0 bits (110), Expect = 3e-06
Identities = 24/69 (34%), Positives = 42/69 (60%), Gaps = 3/69 (4%)
Query: 13 IFEKYAAKEGDPDQLSKDELKLLIQAEFPSLLKG---PNTLDDLFQELDKNGDGEVSFEE 69
+F KY ++G+ LSK ELK L++ E +LK P+T+D + LD++ D + F E
Sbjct: 14 VFYKYTKQDGECGTLSKGELKELLEKELHPVLKNPDDPDTVDVIMHMLDRDHDRRLDFTE 73
Query: 70 FQVLVKKIS 78
F +++ K++
Sbjct: 74 FLLMIFKLT 82
>gi|5174661 S100 calcium binding protein A2 [Homo sapiens]
Length = 97
Score = 47.0 bits (110), Expect = 3e-06
Identities = 26/68 (38%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Query: 14 FEKYAAKEGDPDQLSKDELKLLIQAEFPSLL---KGPNTLDDLFQELDKNGDGEVSFEEF 70
F KY+ +EGD +LSK E+K L+ E PS + L L LD+N D +V F+E+
Sbjct: 16 FHKYSCQEGDKFKLSKGEMKELLHKELPSFVGEKVDEEGLKKLMGSLDENSDQQVDFQEY 75
Query: 71 QVLVKKIS 78
V + I+
Sbjct: 76 AVFLALIT 83
>gi|4506761 S100 calcium binding protein A10 [Homo sapiens]
Length = 97
Score = 45.8 bits (107), Expect = 7e-06
Identities = 25/70 (35%), Positives = 42/70 (60%), Gaps = 6/70 (8%)
Query: 8 EELKRIFEKYAAKEGDPDQLSKDELKLLIQAEFPSLL---KGPNTLDDLFQELDKNGDGE 64
E + F K+A GD L+K++L++L++ EFP L K P +D + ++LD+ DG+
Sbjct: 10 ETMMFTFHKFA---GDKGYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQCRDGK 66
Query: 65 VSFEEFQVLV 74
V F+ F L+
Sbjct: 67 VGFQSFFSLI 76
>gi|115298657 S100 calcium binding protein A7 [Homo sapiens]
Length = 101
Score = 43.1 bits (100), Expect = 5e-05
Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 8/71 (11%)
Query: 13 IFEKYAAKEGDPDQLSKDELKLLIQAEFPSLL-----KGPNTLDDLFQELDKNGDGEVSF 67
+F KY ++ D++ K L +++ FP+ L KG N L D+F++ DKN D ++ F
Sbjct: 16 MFHKYTRRD---DKIEKPSLLTMMKENFPNFLSACDKKGTNYLADVFEKKDKNEDKKIDF 72
Query: 68 EEFQVLVKKIS 78
EF L+ I+
Sbjct: 73 SEFLSLLGDIA 83
>gi|4507615 troponin C, slow [Homo sapiens]
Length = 161
Score = 40.8 bits (94), Expect = 2e-04
Identities = 24/76 (31%), Positives = 44/76 (57%), Gaps = 4/76 (5%)
Query: 2 STKKSPEELKRIFEKYAAKEGDPDQLSKDELKLLIQAEFPSLLKGPNTLDDLFQELDKNG 61
S KS EEL +F + K D + DELK+++QA ++ + + +++L ++ DKN
Sbjct: 89 SKGKSEEELSDLFRMFD-KNAD-GYIDLDELKIMLQATGETITE--DDIEELMKDGDKNN 144
Query: 62 DGEVSFEEFQVLVKKI 77
DG + ++EF +K +
Sbjct: 145 DGRIDYDEFLEFMKGV 160
Score = 32.0 bits (71), Expect = 0.11
Identities = 19/72 (26%), Positives = 37/72 (51%), Gaps = 4/72 (5%)
Query: 6 SPEELKRIFEKYAAKEGDPDQLSKDELKLLIQAEFPSLLKGPNT--LDDLFQELDKNGDG 63
+PEEL+ + ++ E + DE +++ KG + L DLF+ DKN DG
Sbjct: 53 TPEELQEMIDE--VDEDGSGTVDFDEFLVMMVRCMKDDSKGKSEEELSDLFRMFDKNADG 110
Query: 64 EVSFEEFQVLVK 75
+ +E +++++
Sbjct: 111 YIDLDELKIMLQ 122
>gi|55749678 ninein-like [Homo sapiens]
Length = 1382
Score = 40.0 bits (92), Expect = 4e-04
Identities = 25/68 (36%), Positives = 43/68 (63%), Gaps = 4/68 (5%)
Query: 6 SPE-ELKRIFEKYAAKEGDPDQLSKDELKLLIQAEFPSLLKGPNTLDDLFQELDKNGDGE 64
+PE +++ ++E+ G LS+ EL ++ Q+ L+ L+DLF +LD++GDG+
Sbjct: 196 TPESQIRGVWEELGV--GSSGHLSEQELAVVCQSVGLQGLE-KEELEDLFNKLDQDGDGK 252
Query: 65 VSFEEFQV 72
VS EEFQ+
Sbjct: 253 VSLEEFQL 260
>gi|21624641 calcium binding protein 4 [Homo sapiens]
Length = 275
Score = 38.1 bits (87), Expect = 0.002
Identities = 22/64 (34%), Positives = 38/64 (59%), Gaps = 4/64 (6%)
Query: 16 KYAAKEGDPDQ---LSKDELKLLIQAEFPSLLKGPNTLDDLFQELDKNGDGEVSFEEFQV 72
+ A +E D D+ ++ EL+ + A L GP LD++ +E+D NGDG V F+EF +
Sbjct: 212 RIAFREFDRDRDGRITVAELREAVPALLGEPLAGPE-LDEMLREVDLNGDGTVDFDEFVM 270
Query: 73 LVKK 76
++ +
Sbjct: 271 MLSR 274
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.310 0.133 0.353
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,993,049
Number of Sequences: 37866
Number of extensions: 113782
Number of successful extensions: 628
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 140
Number of HSP's successfully gapped in prelim test: 45
Number of HSP's that attempted gapping in prelim test: 391
Number of HSP's gapped (non-prelim): 262
length of query: 79
length of database: 18,247,518
effective HSP length: 51
effective length of query: 28
effective length of database: 16,316,352
effective search space: 456857856
effective search space used: 456857856
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.