NINL 32865

Name: NINL	Sequence: fasta or formatted (1382aa)		NCBI GI: 55749678
Description: ninein-like		Referenced in: Centrosome
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.4 116 2 C cysteine 1.5 21 2 D aspartate 4.5 62 2 E glutamate 13.7 190 4 F phenylalanine 1.7 24 1 G glycine 5.5 76 1 H histidine 2.5 34 2 I isoleucine 1.4 20 1 K lysine 5.0 69 2 L leucine 13.4 185 3 M methionine 1.3 18 2 N asparagine 2.2 30 1 P proline 4.3 59 2 Q glutamine 8.8 121 3 R arginine 7.6 105 3 S serine 7.7 106 3 T threonine 3.3 45 4 V valine 5.0 69 2 W tryptophan 1.3 18 1 Y tyrosine 1.0 14 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 ninein-like NIN 0.160 ninein isoform 5 NIN 0.160 ninein isoform 1 NIN 0.160 ninein isoform 2 NIN 0.148 ninein isoform 4 PLEC1 0.036 plectin 1 isoform 11 PLEC1 0.036 plectin 1 isoform 10 PLEC1 0.036 plectin 1 isoform 8 PLEC1 0.036 plectin 1 isoform 7 PLEC1 0.036 plectin 1 isoform 6 PLEC1 0.036 plectin 1 isoform 3 PLEC1 0.036 plectin 1 isoform 2 PLEC1 0.036 plectin 1 isoform 1 CEP250 0.032 centrosomal protein 2 MYH14 0.030 myosin, heavy chain 14 isoform 1 MYH14 0.030 myosin, heavy chain 14 isoform 2 MYH14 0.030 myosin, heavy chain 14 isoform 3 CROCC 0.029 ciliary rootlet coiled-coil NUMA1 0.029 nuclear mitotic apparatus protein 1 TCHH 0.029 trichohyalin MYH10 0.028 myosin, heavy polypeptide 10, non-muscle MYH11 0.026 smooth muscle myosin heavy chain 11 isoform SM1A [Ho... MYH11 0.026 smooth muscle myosin heavy chain 11 isoform SM1B [Ho... MYH11 0.026 smooth muscle myosin heavy chain 11 isoform SM2B [Ho... MYH11 0.026 smooth muscle myosin heavy chain 11 isoform SM2A [Ho... CGN 0.024 cingulin MYH9 0.023 myosin, heavy polypeptide 9, non-muscle CCDC88B 0.023 coiled-coil domain containing 88 CEP290 0.020 centrosomal protein 290kDa PCNT 0.020 pericentrin Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.