Search of human proteins with 47132587

Search of human proteins with 47132587

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|47132587 protein kinase C, delta binding protein [Homo
sapiens]
         (261 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|47132587 protein kinase C, delta binding protein [Homo sapiens]    506   e-143
gi|4759082 serum deprivation response protein [Homo sapiens]          135   5e-32
gi|42734430 polymerase I and transcript release factor [Homo sap...   103   2e-22
gi|66472922 muscle-related coiled-coil protein [Homo sapiens]          83   2e-16
gi|155030232 proline, glutamic acid and leucine rich protein 1 [...    47   2e-05
gi|17136078 VGF nerve growth factor inducible precursor [Homo sa...    46   3e-05
gi|34365793 WNK lysine deficient protein kinase 4 [Homo sapiens]       45   5e-05
gi|209977046 fibrous sheath CABYR binding protein [Homo sapiens]       44   1e-04
gi|54860079 nadrin isoform 1 [Homo sapiens]                            43   2e-04
gi|217416350 cask-interacting protein 2 isoform b [Homo sapiens]       43   3e-04
gi|217416347 cask-interacting protein 2 isoform a [Homo sapiens]       43   3e-04
gi|54860105 nadrin isoform 2 [Homo sapiens]                            42   4e-04
gi|4557853 transcription factor SOX9 [Homo sapiens]                    42   5e-04
gi|116256445 nuclear receptor co-repressor 2 isoform 2 [Homo sap...    41   0.001
gi|194248095 epsin 1 isoform b [Homo sapiens]                          41   0.001
gi|62000702 diacylglycerol kinase kappa [Homo sapiens]                 41   0.001
gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens]              41   0.001
gi|46852161 methyl-CpG binding domain protein 6 [Homo sapiens]         40   0.002
gi|226498192 atonal homolog 8 [Homo sapiens]                           40   0.003
gi|90903231 huntingtin [Homo sapiens]                                  40   0.003
gi|19718731 bromodomain-containing protein 4 isoform long [Homo ...    40   0.003
gi|55750053 atrophin-1 [Homo sapiens]                                  40   0.003
gi|55750041 atrophin-1 [Homo sapiens]                                  40   0.003
gi|5174573 myeloid/lymphoid or mixed-lineage leukemia trithorax ...    40   0.003
gi|114431244 von Willebrand factor C and EGF domains [Homo sapiens]    40   0.003
gi|85815829 SH3-domain binding protein 1 [Homo sapiens]                40   0.003
gi|41322923 plectin 1 isoform 11 [Homo sapiens]                        39   0.003
gi|41322914 plectin 1 isoform 10 [Homo sapiens]                        39   0.003
gi|41322919 plectin 1 isoform 8 [Homo sapiens]                         39   0.003
gi|41322910 plectin 1 isoform 7 [Homo sapiens]                         39   0.003

>gi|47132587 protein kinase C, delta binding protein [Homo sapiens]
          Length = 261

 Score =  506 bits (1302), Expect = e-143
 Identities = 261/261 (100%), Positives = 261/261 (100%)

Query: 1   MRESALERGPVPEAPAGGPVHAVTVVTLLEKLASMLETLRERQGGLARRQGGLAGSVRRI 60
           MRESALERGPVPEAPAGGPVHAVTVVTLLEKLASMLETLRERQGGLARRQGGLAGSVRRI
Sbjct: 1   MRESALERGPVPEAPAGGPVHAVTVVTLLEKLASMLETLRERQGGLARRQGGLAGSVRRI 60

Query: 61  QSGLGALSRSHDTTSNTLAQLLAKAERVSSHANAAQERAVRRAAQVQRLEANHGLLVARG 120
           QSGLGALSRSHDTTSNTLAQLLAKAERVSSHANAAQERAVRRAAQVQRLEANHGLLVARG
Sbjct: 61  QSGLGALSRSHDTTSNTLAQLLAKAERVSSHANAAQERAVRRAAQVQRLEANHGLLVARG 120

Query: 121 KLHVLLFKEEGEVPASAFQKAPEPLGPADQSELGPEQLEAEVGESSDEEPVESRAQRLRR 180
           KLHVLLFKEEGEVPASAFQKAPEPLGPADQSELGPEQLEAEVGESSDEEPVESRAQRLRR
Sbjct: 121 KLHVLLFKEEGEVPASAFQKAPEPLGPADQSELGPEQLEAEVGESSDEEPVESRAQRLRR 180

Query: 181 TGLQKVQSLRRALSGRKGPAAPPPTPVKPPRLGPGRSAEAQPEAQPALEPTLEPEPPQDT 240
           TGLQKVQSLRRALSGRKGPAAPPPTPVKPPRLGPGRSAEAQPEAQPALEPTLEPEPPQDT
Sbjct: 181 TGLQKVQSLRRALSGRKGPAAPPPTPVKPPRLGPGRSAEAQPEAQPALEPTLEPEPPQDT 240

Query: 241 EEDPGRPGAAEEALLQMESVA 261
           EEDPGRPGAAEEALLQMESVA
Sbjct: 241 EEDPGRPGAAEEALLQMESVA 261


>gi|4759082 serum deprivation response protein [Homo sapiens]
          Length = 425

 Score =  135 bits (339), Expect = 5e-32
 Identities = 79/195 (40%), Positives = 119/195 (61%), Gaps = 20/195 (10%)

Query: 20  VHAVTVVTLLEKLASMLETLRERQGGLARRQGGLAGSVRRIQSGLGALSRSHDTTSNTLA 79
           V+AVTV+TLL+KL +ML+ ++E Q  + +RQ  L GSV+ IQ+ L  LS+   +TSNT++
Sbjct: 53  VNAVTVLTLLDKLVNMLDAVQENQHKMEQRQISLEGSVKGIQNDLTKLSKYQASTSNTVS 112

Query: 80  QLLAKAERVSSHANAAQERAVRRAAQVQRLEANHGLLVARGKLHVLLFKEEGEVPASAFQ 139
           +LL K+ +VS+H  A +ER  R+ AQV+RLE NH  L+ R    VL+F+EE E+PAS F 
Sbjct: 113 KLLEKSRKVSAHTRAVKERMDRQCAQVKRLENNHAQLLRRNHFKVLIFQEENEIPASVFV 172

Query: 140 KAPEPLGPADQSELGPEQLEAE--------------------VGESSDEEPVESRAQRLR 179
           K P       + EL  E    E                    + +S++E+  ESRA++++
Sbjct: 173 KQPVSGAVEGKEELPDENKSLEETLHTVDLSSDDDLPHDEEALEDSAEEKVEESRAEKIK 232

Query: 180 RTGLQKVQSLRRALS 194
           R+ L+KV SL++A S
Sbjct: 233 RSSLKKVDSLKKAFS 247


>gi|42734430 polymerase I and transcript release factor [Homo
           sapiens]
          Length = 390

 Score =  103 bits (256), Expect = 2e-22
 Identities = 67/192 (34%), Positives = 110/192 (57%), Gaps = 14/192 (7%)

Query: 20  VHAVTVVTLLEKLASMLETLRERQGGLARRQGGLAGSVRRIQSGLGALSRSHDTTSNTLA 79
           V+ V V++LL+K+   ++ ++  Q  L  RQ  + G+V+ IQ  L  L ++H TTSNT++
Sbjct: 49  VNGVLVLSLLDKIIGAVDQIQLTQAQLEERQAEMEGAVQSIQGELSKLGKAHATTSNTVS 108

Query: 80  QLLAKAERVSSHANAAQERAVRRAAQVQRLEANHGLLVARGKLHVLLFKEEGEVPA---- 135
           +LL K  +VS +    +    R+A Q+++LE N   L+ R    V+++++E ++PA    
Sbjct: 109 KLLEKVRKVSVNVKTVRGSLERQAGQIKKLEVNEAELLRRRNFKVMIYQDEVKLPAKLSI 168

Query: 136 SAFQKAPEPLGPADQSELG----PEQLEAEVGESSDE----EPV--ESRAQRLRRTGLQK 185
           S   K  E L   +  ELG    PE+  A +  SSDE    E V  ESRA+R++R+GL++
Sbjct: 169 SKSLKESEALPEKEGEELGEGERPEEDAAALELSSDEAVEVEEVIEESRAERIKRSGLRR 228

Query: 186 VQSLRRALSGRK 197
           V   ++A S  K
Sbjct: 229 VDDFKKAFSKEK 240


>gi|66472922 muscle-related coiled-coil protein [Homo sapiens]
          Length = 364

 Score = 83.2 bits (204), Expect = 2e-16
 Identities = 49/175 (28%), Positives = 97/175 (55%), Gaps = 3/175 (1%)

Query: 22  AVTVVTLLEKLASMLETLRERQGGLARRQGGLAGSVRRIQSGLGALSRSHDTTSNTLAQL 81
           A+T+VT+L+K+AS++++++  Q  +  R   +  +++ +Q  L  LS+SH  T + + +L
Sbjct: 30  ALTIVTVLDKVASIVDSVQASQKRIEERHREMENAIKSVQIDLLKLSQSHSNTGHIINKL 89

Query: 82  LAKAERVSSHANAAQERAVRRAAQVQRLEANHGLLVARGKLHVLLFKEEGEVPASAFQKA 141
             K  +VS+H    + R  ++   V+++E     ++ + K  V++F+E+   P S     
Sbjct: 90  FEKTRKVSAHIKDVKARVEKQQIHVKKVEVKQEEIMKKNKFRVVIFQEKFRCPTSLSVVK 149

Query: 142 PEPLGPADQSELGPEQLEAEVGESSDEE--PVESRAQRLRRTGLQKVQSLRRALS 194
              L   +Q E   +  +  V  SSDEE    ESR+ RLR++G + + ++++A S
Sbjct: 150 DRNL-TENQEEDDDDIFDPPVDLSSDEEYYVEESRSARLRKSGKEHIDNIKKAFS 203


>gi|155030232 proline, glutamic acid and leucine rich protein 1 [Homo
            sapiens]
          Length = 1130

 Score = 46.6 bits (109), Expect = 2e-05
 Identities = 46/133 (34%), Positives = 61/133 (45%), Gaps = 16/133 (12%)

Query: 127  FKEEGEVPASAFQKAPEPLGPADQSELGPEQLEAEVGESSDEEPVESRAQRLRRTGLQKV 186
            F+EE E     F++  E      + E   E+ E E GE  +EE  E   +      L++V
Sbjct: 910  FEEEEEDEEEYFEEEEE------EEEEFEEEFEEEEGELEEEEEEEDEEEEEE---LEEV 960

Query: 187  QSLRRALSGRK-GPAAPPPTPVKPPRLGPGRS-AEAQPEAQPALEPTLEPEPPQDTEEDP 244
            + L    +G +    APPP P  PP L P  S  + QPE +P     LE E P  TEE+ 
Sbjct: 961  EDLEFGTAGGEVEEGAPPP-PTLPPALPPPESPPKVQPEPEPEPGLLLEVEEP-GTEEER 1018

Query: 245  G---RPGAAEEAL 254
            G    P  A EAL
Sbjct: 1019 GADTAPTLAPEAL 1031



 Score = 34.3 bits (77), Expect = 0.11
 Identities = 16/40 (40%), Positives = 18/40 (45%)

Query: 198 GPAAPPPTPVKPPRLGPGRSAEAQPEAQPALEPTLEPEPP 237
           G   PP  P  PP   P   A+ +PE  PA    L P PP
Sbjct: 805 GATPPPIAPTGPPTASPPVPAKEEPEELPAAPGPLPPPPP 844



 Score = 30.8 bits (68), Expect = 1.2
 Identities = 37/125 (29%), Positives = 45/125 (36%), Gaps = 12/125 (9%)

Query: 129  EEGEVPASAFQKA--PEPLGPADQSELGPEQ-LEAEVGE-SSDEEPVESRAQRLRRTGLQ 184
            EEG  P      A  P    P  Q E  PE  L  EV E  ++EE     A  L    L 
Sbjct: 973  EEGAPPPPTLPPALPPPESPPKVQPEPEPEPGLLLEVEEPGTEEERGADTAPTLAPEALP 1032

Query: 185  KVQSLRRALSGRKGPAAPPPT------PVKPPRLGPGRSAEAQPEAQPALEPTLEPEPPQ 238
                + R   G    A PPP       P  PP L    + +   + QP  E   E E   
Sbjct: 1033 SQGEVER--EGESPAAGPPPQELVEEEPSAPPTLLEEETEDGSDKVQPPPETPAEEEMET 1090

Query: 239  DTEED 243
            +TE +
Sbjct: 1091 ETEAE 1095



 Score = 28.5 bits (62), Expect = 6.2
 Identities = 18/52 (34%), Positives = 20/52 (38%), Gaps = 8/52 (15%)

Query: 199 PAAPPPTPVKPPRLGPGRSAEAQPEAQPALEPTLEPEPP--QDTEEDPGRPG 248
           P   PP P  PP      S    P   P   PT  P  P  ++ EE P  PG
Sbjct: 792 PEGLPPLPPPPP------SGATPPPIAPTGPPTASPPVPAKEEPEELPAAPG 837


>gi|17136078 VGF nerve growth factor inducible precursor [Homo
           sapiens]
          Length = 615

 Score = 46.2 bits (108), Expect = 3e-05
 Identities = 51/209 (24%), Positives = 74/209 (35%), Gaps = 20/209 (9%)

Query: 53  LAGSVRRIQSGLGALSRSHDTTSNTLAQLLAKAERVSSHANAAQERAVRRAAQVQRLEAN 112
           L G  R+   G   L  + +   +   +  A+ ER        +E      A+ +  EA 
Sbjct: 337 LQGGARQRGLGGRGLQEAAEERESAREEEEAEQERRGGEERVGEEDEEAAEAEAEAEEAE 396

Query: 113 HGLLVARGKLHVLLFKEEGEVPASAFQKAPEPLGPAD---QSELGPEQLEAEVGESSDEE 169
                 R + + LLF EE +  A A  K  +   P     ++E   E  E E  E  D +
Sbjct: 397 ------RARQNALLFAEEEDGEAGAEDKRSQEETPGHRRKEAEGTEEGGEEEDDEEMDPQ 450

Query: 170 PVESRAQ---RLRRTGLQKVQSLRRALSGRKGPAAPPPTPVKPPRLGPGRSAEAQPEAQP 226
            ++S  +   +L       V  +      RK     PP PV PPR  P  +    P+  P
Sbjct: 451 TIDSLIELSTKLHLPADDVVSIIEEVEEKRKRKKNAPPEPVPPPRAAPAPTHVRSPQPPP 510

Query: 227 ALEPTLEPE--------PPQDTEEDPGRP 247
                   E        PP D EED   P
Sbjct: 511 PAPAPARDELPDWNEVLPPWDREEDEVYP 539



 Score = 28.5 bits (62), Expect = 6.2
 Identities = 56/200 (28%), Positives = 78/200 (39%), Gaps = 26/200 (13%)

Query: 10  PVPEAPAGGPVHAVTVVTLLEKLASMLETLRERQGGLARRQGGLAGSVRRIQSGLGALSR 69
           P P+ P  GP  A      LE LAS+L+ LR+     A+RQ   A +           +R
Sbjct: 138 PRPQTPENGP-EASDPSEELEALASLLQELRDFSPSSAKRQQETAAAETE--------TR 188

Query: 70  SHDTTSNTLAQLLAKAERV-SSHANAAQERAVRRA-------AQVQRLEANHGLLVARGK 121
           +H  T   L       ERV  +     Q R   RA       +Q Q    + G L    K
Sbjct: 189 THTLTRVNLES--PGPERVWRASWGEFQARVPERAPLPPPAPSQFQARMPDSGPLPETHK 246

Query: 122 LHVLLFKEEGEVPASAFQKAPEPLGPADQSELGPEQLEAEVGESSDEEPVESRAQRLRRT 181
                F E    P +   +A  PL  A Q    P   +A   ES+     E+  +RL + 
Sbjct: 247 -----FGEGVSSPKTHLGEALAPLSKAYQGVAAPFP-KARRPESALLGGSEA-GERLLQQ 299

Query: 182 GLQKVQSLRRALSGRKGPAA 201
           GL +V++ RR     +  AA
Sbjct: 300 GLAQVEAGRRQAEATRQAAA 319


>gi|34365793 WNK lysine deficient protein kinase 4 [Homo sapiens]
          Length = 1243

 Score = 45.4 bits (106), Expect = 5e-05
 Identities = 36/117 (30%), Positives = 45/117 (38%), Gaps = 9/117 (7%)

Query: 140 KAPEPLGPADQSELGPEQLEAE-VGESSDEEPVESRAQRLRRTGLQKVQSLRRALSGRKG 198
           + P PLG A Q  LGP    A      ++  P  SR  R     L         LS    
Sbjct: 23  RPPPPLGTAGQPRLGPPPRRARRFSGKAEPRPRSSRLSRRSSVDLG-------LLSSWSL 75

Query: 199 PAAPPPTPVKPP-RLGPGRSAEAQPEAQPALEPTLEPEPPQDTEEDPGRPGAAEEAL 254
           PA+P P P  PP   GPG +    P ++   E T     P    ED  RP   + A+
Sbjct: 76  PASPAPDPPDPPDSAGPGPARSPPPSSKEPPEGTWTEGAPVKAAEDSARPELPDSAV 132



 Score = 30.0 bits (66), Expect = 2.1
 Identities = 29/104 (27%), Positives = 44/104 (42%), Gaps = 16/104 (15%)

Query: 145 LGPADQSELGPEQLEAEVGESSDEEPVESRAQRLRRTGLQ-KVQSLRRALSGRKGPAAPP 203
           LG     E+  E +   +   +D +PV +RA R R   +Q K + LR+A      P  P 
Sbjct: 480 LGRDAAEEVAQEMVALGLVCEADYQPV-ARAVRERVAAIQRKREKLRKARELEALPPEPG 538

Query: 204 PTPVKPPRLGPGRSAEAQPEAQPALEPTLEPEPPQDTEEDPGRP 247
           P P   P + PG              P++ P  P++ E D  +P
Sbjct: 539 PPPATVP-MAPG-------------PPSVFPPEPEEPEADQHQP 568


>gi|209977046 fibrous sheath CABYR binding protein [Homo sapiens]
          Length = 825

 Score = 44.3 bits (103), Expect = 1e-04
 Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 12/131 (9%)

Query: 132 EVPASAFQKAPEPLGPADQSELGPEQLEAEV--GESSDEEPVESRAQRLRRTGLQKVQSL 189
           E PA    +A  PL     +E  P ++++    G S +E P+E +      T  ++  + 
Sbjct: 537 ETPA----EAQSPLSEETSAEEAPAEVQSPSAKGVSIEEAPLELQPPSGEETTAEEASAA 592

Query: 190 RRALSGRKGPAAPPPTPVKPPRLGPGRSAEAQPEAQPALEPTLEPEPPQDTEEDPG--RP 247
            + L+  +  A   P  V+PP   P   A A+ +  PA E   E +PP   EE P   +P
Sbjct: 593 IQLLAATEASAEEAPAEVQPP---PAEEAPAEVQPPPAEEAPAEVQPP-PAEEAPAEVQP 648

Query: 248 GAAEEALLQME 258
             AEEA  +++
Sbjct: 649 PPAEEAPAEVQ 659



 Score = 31.6 bits (70), Expect = 0.73
 Identities = 29/127 (22%), Positives = 51/127 (40%), Gaps = 12/127 (9%)

Query: 137 AFQKAPEPLGPADQSELGPEQLEAEVGE-SSDEEPVESRAQRLRRTGLQKVQSLRRALSG 195
           + ++AP  L P    E   E+  A +   ++ E   E     ++    ++  +  +    
Sbjct: 568 SIEEAPLELQPPSGEETTAEEASAAIQLLAATEASAEEAPAEVQPPPAEEAPAEVQPPPA 627

Query: 196 RKGPAA--PPPTPVKPPRLGPGRSAEAQPEAQPALEPTLEPEPPQDTEEDPGRPGAAEEA 253
            + PA   PPP    P  + P  + EA  E QP         PP +      +P  AEEA
Sbjct: 628 EEAPAEVQPPPAEEAPAEVQPPPAEEAPAEVQP---------PPAEEAPAEVQPPPAEEA 678

Query: 254 LLQMESV 260
             +++S+
Sbjct: 679 PAEVQSL 685



 Score = 29.6 bits (65), Expect = 2.8
 Identities = 28/110 (25%), Positives = 47/110 (42%), Gaps = 8/110 (7%)

Query: 157 QLEAEVGESSDEEPVESRAQRLRRTGLQKVQSLRRALSGRKGPAAPPPTPVKPPRLGPGR 216
           QL A +   +DE P E+++     T  ++  +  ++ S +       P  ++PP      
Sbjct: 526 QLLAAIEAPADETPAEAQSPLSEETSAEEAPAEVQSPSAKGVSIEEAPLELQPPSGEETT 585

Query: 217 SAEAQPEAQ--PALEPTLEPEP----PQDTEEDPG--RPGAAEEALLQME 258
           + EA    Q   A E + E  P    P   EE P   +P  AEEA  +++
Sbjct: 586 AEEASAAIQLLAATEASAEEAPAEVQPPPAEEAPAEVQPPPAEEAPAEVQ 635


>gi|54860079 nadrin isoform 1 [Homo sapiens]
          Length = 881

 Score = 43.1 bits (100), Expect = 2e-04
 Identities = 34/137 (24%), Positives = 55/137 (40%), Gaps = 21/137 (15%)

Query: 129 EEGEVPASAFQKAPEPLGPADQSELGPEQLEAEVGESSDEEPVESRAQRL-----RRTGL 183
           E+G  P       P+P  P   +   P +  +++    ++    + + +L          
Sbjct: 566 EQGPSPGDG--SPPKPKDPVSAAVPAPGRNNSQIASGQNQPQAAAGSHQLSMGQPHNAAG 623

Query: 184 QKVQSLRRALSGRKGPAAPPPTPVKPPRLGPGRSAEAQPEAQPALEPTLEPEPP------ 237
               +LRRA+   K PA  PP P  PP   PG  + +     P   P+L P+PP      
Sbjct: 624 PSPHTLRRAV---KKPAPAPPKPGNPPPGHPGGQSSSGTSQHP---PSLSPKPPTRSPSP 677

Query: 238 --QDTEEDPGRPGAAEE 252
             Q T + PG+P A  +
Sbjct: 678 PTQHTGQPPGQPSAPSQ 694


>gi|217416350 cask-interacting protein 2 isoform b [Homo sapiens]
          Length = 1120

 Score = 42.7 bits (99), Expect = 3e-04
 Identities = 44/154 (28%), Positives = 61/154 (39%), Gaps = 29/154 (18%)

Query: 125  LLFKEEGEVPASAFQKAPEPLGPADQSELGPEQLEAEVGESSDEEPVESRAQRLRRTGLQ 184
            L F EEG +     ++ P+P GP  +    P  L+  + ES   + V+ R +   R  LQ
Sbjct: 868  LPFAEEGNL---TIKQRPKPAGPPPRETPVPPGLDFNLTES---DTVKRRPKCREREPLQ 921

Query: 185  KVQSLRRALSGRKGPAAPPPTPVKPPRLGPGRSAEAQPE--------------AQPALEP 230
                     S   GPAAP P+P   P   P  S+  QPE                PA++P
Sbjct: 922  TALLAFGVASATPGPAAPLPSPT--PGESPPASSLPQPEPSSLPAQGVPTPLAPSPAMQP 979

Query: 231  TLEPEPPQDTEEDPG-------RPGAAEEALLQM 257
             + P P    E            P AA  ALL++
Sbjct: 980  PVPPCPGPGLESSAASRWNGETEPPAAPAALLKV 1013



 Score = 32.0 bits (71), Expect = 0.56
 Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 2/65 (3%)

Query: 193  LSGRKGPA-APPPTPVKPPRLGPGRSAEAQPEAQPALEPTLE-PEPPQDTEEDPGRPGAA 250
            L+ R GP   PPP P     +GPG++ +   +   +L   L   E    T+E  G P A+
Sbjct: 1037 LAPRLGPRPVPPPRPESTGTVGPGQAQQRLEQTSSSLAAALRAAEKSIGTKEQEGTPSAS 1096

Query: 251  EEALL 255
             + +L
Sbjct: 1097 TKHIL 1101



 Score = 31.6 bits (70), Expect = 0.73
 Identities = 30/98 (30%), Positives = 39/98 (39%), Gaps = 16/98 (16%)

Query: 155 PEQLEAEVGESSDEEPV-ESRAQRLRRTGLQKVQSLRRALSGRKGPAAPPPTPVKPPRLG 213
           P++L +  G S +  P+ ES   +   TG +     RR LS   GP+ PP  P      G
Sbjct: 791 PKRLSSVSGPSPEPPPLDESPGPKEGATGPR-----RRTLSEPAGPSEPPGPPAP---AG 842

Query: 214 PGRSAEAQPEAQPALEPTLEPEPPQDTEEDPGRPGAAE 251
           P    E +       EP  E  PP       G P A E
Sbjct: 843 PASDTEEE-------EPGPEGTPPSRGSSGEGLPFAEE 873


>gi|217416347 cask-interacting protein 2 isoform a [Homo sapiens]
          Length = 1202

 Score = 42.7 bits (99), Expect = 3e-04
 Identities = 44/154 (28%), Positives = 61/154 (39%), Gaps = 29/154 (18%)

Query: 125  LLFKEEGEVPASAFQKAPEPLGPADQSELGPEQLEAEVGESSDEEPVESRAQRLRRTGLQ 184
            L F EEG +     ++ P+P GP  +    P  L+  + ES   + V+ R +   R  LQ
Sbjct: 950  LPFAEEGNL---TIKQRPKPAGPPPRETPVPPGLDFNLTES---DTVKRRPKCREREPLQ 1003

Query: 185  KVQSLRRALSGRKGPAAPPPTPVKPPRLGPGRSAEAQPE--------------AQPALEP 230
                     S   GPAAP P+P   P   P  S+  QPE                PA++P
Sbjct: 1004 TALLAFGVASATPGPAAPLPSPT--PGESPPASSLPQPEPSSLPAQGVPTPLAPSPAMQP 1061

Query: 231  TLEPEPPQDTEEDPG-------RPGAAEEALLQM 257
             + P P    E            P AA  ALL++
Sbjct: 1062 PVPPCPGPGLESSAASRWNGETEPPAAPAALLKV 1095



 Score = 32.0 bits (71), Expect = 0.56
 Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 2/65 (3%)

Query: 193  LSGRKGPA-APPPTPVKPPRLGPGRSAEAQPEAQPALEPTLE-PEPPQDTEEDPGRPGAA 250
            L+ R GP   PPP P     +GPG++ +   +   +L   L   E    T+E  G P A+
Sbjct: 1119 LAPRLGPRPVPPPRPESTGTVGPGQAQQRLEQTSSSLAAALRAAEKSIGTKEQEGTPSAS 1178

Query: 251  EEALL 255
             + +L
Sbjct: 1179 TKHIL 1183



 Score = 31.6 bits (70), Expect = 0.73
 Identities = 30/98 (30%), Positives = 39/98 (39%), Gaps = 16/98 (16%)

Query: 155 PEQLEAEVGESSDEEPV-ESRAQRLRRTGLQKVQSLRRALSGRKGPAAPPPTPVKPPRLG 213
           P++L +  G S +  P+ ES   +   TG +     RR LS   GP+ PP  P      G
Sbjct: 873 PKRLSSVSGPSPEPPPLDESPGPKEGATGPR-----RRTLSEPAGPSEPPGPPAP---AG 924

Query: 214 PGRSAEAQPEAQPALEPTLEPEPPQDTEEDPGRPGAAE 251
           P    E +       EP  E  PP       G P A E
Sbjct: 925 PASDTEEE-------EPGPEGTPPSRGSSGEGLPFAEE 955


>gi|54860105 nadrin isoform 2 [Homo sapiens]
          Length = 803

 Score = 42.4 bits (98), Expect = 4e-04
 Identities = 31/127 (24%), Positives = 52/127 (40%), Gaps = 19/127 (14%)

Query: 139 QKAPEPLGPADQSELGPEQLEAEVGESSDEEPVESRAQRL-----RRTGLQKVQSLRRAL 193
           +  P+P  P   +   P +  +++    ++    + + +L              +LRRA+
Sbjct: 496 ESPPKPKDPVSAAVPAPGRNNSQIASGQNQPQAAAGSHQLSMGQPHNAAGPSPHTLRRAV 555

Query: 194 SGRKGPAAPPPTPVKPPRLGPGRSAEAQPEAQPALEPTLEPEPP--------QDTEEDPG 245
              K PA  PP P  PP   PG  + +     P   P+L P+PP        Q T + PG
Sbjct: 556 ---KKPAPAPPKPGNPPPGHPGGQSSSGTSQHP---PSLSPKPPTRSPSPPTQHTGQPPG 609

Query: 246 RPGAAEE 252
           +P A  +
Sbjct: 610 QPSAPSQ 616


>gi|4557853 transcription factor SOX9 [Homo sapiens]
          Length = 509

 Score = 42.0 bits (97), Expect = 5e-04
 Identities = 17/38 (44%), Positives = 22/38 (57%)

Query: 201 APPPTPVKPPRLGPGRSAEAQPEAQPALEPTLEPEPPQ 238
           APPP P +PP+  P   A  QP+A P  +P   P+ PQ
Sbjct: 341 APPPPPQQPPQAPPAPQAPPQPQAAPPQQPAAPPQQPQ 378


>gi|116256445 nuclear receptor co-repressor 2 isoform 2 [Homo
           sapiens]
          Length = 2462

 Score = 41.2 bits (95), Expect = 0.001
 Identities = 37/130 (28%), Positives = 48/130 (36%), Gaps = 16/130 (12%)

Query: 129 EEGEVPASAFQKAPEPLGPADQSELGPEQLEAEVGESSDEEPVES-RAQRLRRTGLQKVQ 187
           EE   P     +  E  G +   E   E+ EA V  SSD E + S   +  + TG     
Sbjct: 692 EEAAFPPVVEDEEMEASGVSGNEEEMVEEAEATVNNSSDTESIPSPHTEAAKDTGQ---- 747

Query: 188 SLRRALSGRKGPAA-----PPPTPVKPPRLGPGRSAEAQPEAQPALEPTLEPEPPQDTEE 242
                 +G K PA      PPP P  PP        E  P ++    PT  P PP  +  
Sbjct: 748 ------NGPKPPATLGADGPPPGPPTPPPEDIPAPTEPTPASEATGAPTPPPAPPSPSAP 801

Query: 243 DPGRPGAAEE 252
            P  P   +E
Sbjct: 802 PPVVPKEEKE 811



 Score = 32.0 bits (71), Expect = 0.56
 Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 4/82 (4%)

Query: 165  SSDEEPVESRAQRLRRTGLQKVQSLRRALSGRK--GPAAP-PPTPVKPPRLGPGRSAEAQ 221
            +S ++P++ +  + R   +  +Q  +     R+   P  P PP P  P  L P   A  Q
Sbjct: 938  ASPQKPLDLKQLKQRAAAIPPIQVTKVHEPPREDAAPTKPAPPAPPPPQNLQPESDAPQQ 997

Query: 222  PEAQPALEPTLEPEPPQDTEED 243
            P + P    +  P PP D E +
Sbjct: 998  PGSSPR-GKSRSPAPPADKEAE 1018


>gi|194248095 epsin 1 isoform b [Homo sapiens]
          Length = 576

 Score = 41.2 bits (95), Expect = 0.001
 Identities = 56/218 (25%), Positives = 82/218 (37%), Gaps = 38/218 (17%)

Query: 56  SVRRIQSGLGALSRSHDTTSNTLAQLLAKAERVSSHANAAQERAVRRAAQVQRLEA---N 112
           +VR     L AL R  D      A  L   E+++  A A+   AV      +  +A   +
Sbjct: 122 NVREKAKQLVALLRDEDRLREERAHALKTKEKLAQTATASSA-AVGSGPPPEAEQAWPQS 180

Query: 113 HGLLVARGKLHVLLFKEEGEVPASAFQKAPEPLGPADQSELGPEQLEAEVGESSDEEPVE 172
            G    + +L + + KEE + P S         GP D +     QL+  +  S +E   E
Sbjct: 181 SGEEELQLQLALAMSKEEADQPPSC--------GPEDDA-----QLQLALSLSREEHDKE 227

Query: 173 SRAQRLRRTGLQK-VQSLRRALSGRKGPA---------APPPTPVKPPRLGPGRSAEAQP 222
            R +R     LQ  ++  +R   G++  +         AP P P   P  GP   A A P
Sbjct: 228 ERIRRGDDLRLQMAIEESKRETGGKEESSLMDLADVFTAPAPAPTTDPWGGPAPMAAAVP 287

Query: 223 EAQPALEPTLEPEPPQDTEE-----------DPGRPGA 249
            A P  +P   P  P   +            DP RP A
Sbjct: 288 TAAPTSDPWGGPPVPPAADPWGGPAPTPASGDPWRPAA 325


>gi|62000702 diacylglycerol kinase kappa [Homo sapiens]
          Length = 1271

 Score = 41.2 bits (95), Expect = 0.001
 Identities = 35/110 (31%), Positives = 44/110 (40%), Gaps = 3/110 (2%)

Query: 134 PASAFQKAPEPLGPADQSELGPEQLEAEVGESSDEEPVESRAQRLRRTGLQKVQSLRRAL 193
           P  A + A EP  P   +E  PE       E + E   ES  +      L+ V      L
Sbjct: 83  PEPATEPASEP-APEPATEPAPEPATEPAPEPAPEPATESAPEPTPEPALESVPEPAPEL 141

Query: 194 SGRKGPA-APPPTPVKPPRLGPGRSAEAQPEAQPALEPTLEPEPPQDTEE 242
           +    P  AP PTP     L P    EA PE +P+  P L  + P DT E
Sbjct: 142 TPEVAPELAPEPTPEPVTELAPEFCPEAAPEFRPSPAPCL-LQCPVDTRE 190



 Score = 36.6 bits (83), Expect = 0.023
 Identities = 21/55 (38%), Positives = 24/55 (43%), Gaps = 10/55 (18%)

Query: 200 AAPPPTPVKPPRLGPGRSAEA----------QPEAQPALEPTLEPEPPQDTEEDP 244
           A+P P P   P L PG   EA          +P  +PA EP  EP P   TE  P
Sbjct: 49  ASPEPIPEPCPELAPGPCPEATSESATELYTEPTPEPATEPASEPAPEPATEPAP 103



 Score = 35.8 bits (81), Expect = 0.039
 Identities = 31/116 (26%), Positives = 42/116 (36%), Gaps = 7/116 (6%)

Query: 129 EEGEVPASAFQKAPEPLGPADQSELGPEQLEAEVGESSDEEPVESRAQRLRRTGLQKVQS 188
           ++GE PA + +  P P  P       P      + E+S E P+      L      +  S
Sbjct: 15  QDGEQPAESPE--PPPPWPPPPPPPAPPPAPPLLSEASPE-PIPEPCPELAPGPCPEATS 71

Query: 189 LRRALSGRKGPAAPPPTPVKPPRLGPGRSAEAQPEAQPALEPTLEPEPPQDTEEDP 244
                S  +    P P P   P   P      +P  +PA EP  EP P   TE  P
Sbjct: 72  E----SATELYTEPTPEPATEPASEPAPEPATEPAPEPATEPAPEPAPEPATESAP 123



 Score = 32.0 bits (71), Expect = 0.56
 Identities = 30/112 (26%), Positives = 39/112 (34%), Gaps = 8/112 (7%)

Query: 134 PASAFQKAPEPLGPADQSELGPEQLEAEVGESSDEEPVESRAQRLRRTGLQKVQSLRRAL 193
           P    + +PEP+ P    EL P        ES+ E   E   +       +       A 
Sbjct: 43  PPLLSEASPEPI-PEPCPELAPGPCPEATSESATELYTEPTPEPATEPASEP------AP 95

Query: 194 SGRKGPAAPPPT-PVKPPRLGPGRSAEAQPEAQPALEPTLEPEPPQDTEEDP 244
                PA  P T P   P   P   +  +P  +PALE   EP P    E  P
Sbjct: 96  EPATEPAPEPATEPAPEPAPEPATESAPEPTPEPALESVPEPAPELTPEVAP 147


>gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens]
          Length = 2400

 Score = 41.2 bits (95), Expect = 0.001
 Identities = 33/119 (27%), Positives = 50/119 (42%), Gaps = 4/119 (3%)

Query: 130  EGEVPASAFQKAPEPLGPADQSELGPEQLEAEVGESSDEEPVESR----AQRLRRTGLQK 185
            EGE   +   +APE  G A     G E  EAE     + E VE++      +    G++ 
Sbjct: 2107 EGEAQKAEGIEAPETEGEAQPESEGIEAPEAEGEAQPESEGVEAQDAEGEAQPESEGIEA 2166

Query: 186  VQSLRRALSGRKGPAAPPPTPVKPPRLGPGRSAEAQPEAQPALEPTLEPEPPQDTEEDP 244
             ++   A    +G  AP       P      + EA+ EAQP LE    PE  ++ + +P
Sbjct: 2167 QEAEEEAQPELEGVEAPEAEGEAQPESEGIEAPEAEGEAQPELEGVEAPEAEEEAQPEP 2225



 Score = 35.0 bits (79), Expect = 0.066
 Identities = 35/127 (27%), Positives = 50/127 (39%), Gaps = 7/127 (5%)

Query: 130  EGEV-PASAFQKAPEPLGPADQSELGPEQLEAEVGESSDEEPVESRAQRLRRT----GLQ 184
            EGE  P S   +APE  G A     G E  +AE     + E +E++           G++
Sbjct: 2122 EGEAQPESEGIEAPEAEGEAQPESEGVEAQDAEGEAQPESEGIEAQEAEEEAQPELEGVE 2181

Query: 185  KVQSLRRALSGRKGPAAPPPTPVKPPRLGPGRSAEAQPEAQPALEPTLEPEPPQDTEEDP 244
              ++   A    +G  AP       P L    + EA+ EAQP  EP     P  + E  P
Sbjct: 2182 APEAEGEAQPESEGIEAPEAEGEAQPELEGVEAPEAEEEAQP--EPEGVETPEAEGEAQP 2239

Query: 245  GRPGAAE 251
               G  +
Sbjct: 2240 ESEGETQ 2246



 Score = 33.5 bits (75), Expect = 0.19
 Identities = 40/123 (32%), Positives = 51/123 (41%), Gaps = 17/123 (13%)

Query: 130  EGEV-PASAFQKAPEPLGPADQSELGPEQLEAEVGESSDEEPVESRAQRLRRTGLQKVQS 188
            EGE  P S   +APE  G A     G E  EAE     + E VE+        G  + +S
Sbjct: 2186 EGEAQPESEGIEAPEAEGEAQPELEGVEAPEAEEEAQPEPEGVETPEAE----GEAQPES 2241

Query: 189  LRRALSGRKGPAAPPPTPVKPPRLGPGRSAEAQPEAQPALE--PTLEPEPPQDTEEDPGR 246
                   +KG  +P  +      LG G+S EA   + P  E  PT  P P  DT     R
Sbjct: 2242 EGETQGEKKG--SPQVS------LGDGQSEEASESSSPVPEDRPTPPPSPGGDTPHQ--R 2291

Query: 247  PGA 249
            PG+
Sbjct: 2292 PGS 2294



 Score = 29.6 bits (65), Expect = 2.8
 Identities = 39/145 (26%), Positives = 54/145 (37%), Gaps = 31/145 (21%)

Query: 128  KEEGEVPASAFQKAPEPLGPADQSELGPEQLEAEVGESSDEEPVESRAQRLRRTGLQKVQ 187
            ++ G+   +   +APE  G A     G E  EAE     D +  E  AQ          +
Sbjct: 1824 QDPGQSDGAEGIEAPEAEGEAQPESEGVEAPEAE----GDAQEAEGEAQP---------E 1870

Query: 188  SLRRALSGRKGPAAPPPTPVKPPRLGPGRSAEAQPEAQPALEPTLEPEPPQDT------- 240
            S        +G A P    V+ P        E QPE++ A  P  E E   +T       
Sbjct: 1871 SEDVEAPEAEGEAQPESEDVETPEA----EWEVQPESEGAEAPEAEKEAQPETESVEALE 1926

Query: 241  ---EEDPGRPGA----AEEALLQME 258
               E++P   GA    AEEA  + E
Sbjct: 1927 TEGEDEPESEGAEAQEAEEAAQEAE 1951



 Score = 29.3 bits (64), Expect = 3.6
 Identities = 40/178 (22%), Positives = 69/178 (38%), Gaps = 11/178 (6%)

Query: 84   KAERVSSHANAAQERAVRRAAQVQRLEANHGLLVARGKLHVLLFKEEGEVPASAFQKAPE 143
            + E V +     ++      A+ Q  EA      A G+      + E EV  S  Q+A E
Sbjct: 1918 ETESVEALETEGEDEPESEGAEAQ--EAEEAAQEAEGQT-----QPESEVIES--QEAEE 1968

Query: 144  PLGPADQSELGPEQLEAEVGESSDEEPVESRAQRLRRTGLQKVQSLRRALSGRKGPAAPP 203
               P +  ++   ++E E  E+  E   ES          +  ++   A     G  A P
Sbjct: 1969 EAQP-ESEDVEALEVEVETQEAEGEAQPESEDVEAPEAEGEMQEAEEEAQPESDGVEAQP 2027

Query: 204  PTPVKPPRLGPGRSAEAQPEAQPALEPTLEPEPPQDTEEDPGRPGAAE-EALLQMESV 260
             +  +  +   G + + + +AQP  +    PE  ++ +E  G    AE EA  + E V
Sbjct: 2028 KSEGEEAQEVEGETQKTEGDAQPESDGVEAPEAEEEAQEAEGEVQEAEGEAHPESEDV 2085



 Score = 28.5 bits (62), Expect = 6.2
 Identities = 40/174 (22%), Positives = 63/174 (36%), Gaps = 19/174 (10%)

Query: 95   AQERAVRRAAQVQRLEANHGLLVARGKLH-----VLLFKEEGEVPASAFQKAPEPLGPAD 149
            A+E A   +  V+ LE       A G+       V   + EGE+  +  +  PE  G   
Sbjct: 1966 AEEEAQPESEDVEALEVEVETQEAEGEAQPESEDVEAPEAEGEMQEAEEEAQPESDGVEA 2025

Query: 150  QSELGPEQLEAEVGESS----DEEPVESRAQRLRRTGLQKVQSLRRALSGRKGPAAPPPT 205
            Q +   E+ +   GE+     D +P     +       ++ Q     +   +G A P   
Sbjct: 2026 QPKSEGEEAQEVEGETQKTEGDAQPESDGVEAPEAE--EEAQEAEGEVQEAEGEAHPESE 2083

Query: 206  PVKPPRLGPGRSAEAQPEAQPALEPTLEPEPPQDTEEDPGRPGAAEEALLQMES 259
             V         + EA+ EAQP  E    PE   + ++  G      E   Q ES
Sbjct: 2084 DVD--------AQEAEGEAQPESEGVEAPEAEGEAQKAEGIEAPETEGEAQPES 2129


>gi|46852161 methyl-CpG binding domain protein 6 [Homo sapiens]
          Length = 1003

 Score = 40.0 bits (92), Expect = 0.002
 Identities = 25/61 (40%), Positives = 29/61 (47%), Gaps = 3/61 (4%)

Query: 188 SLRRALSGRKGPAAPPPTPVKPPRLGPGRS-AEAQPEAQPALEPTLEPEPPQDTEEDPGR 246
           SL   L+G  G   PPP P+ PP  GPG   A  +PE    L  +L P PP D    P  
Sbjct: 559 SLFGVLTG--GGGQPPPEPLLPPPGGPGPPLAPGEPEGPSLLVASLLPPPPSDLLPPPSA 616

Query: 247 P 247
           P
Sbjct: 617 P 617


>gi|226498192 atonal homolog 8 [Homo sapiens]
          Length = 321

 Score = 39.7 bits (91), Expect = 0.003
 Identities = 50/187 (26%), Positives = 63/187 (33%), Gaps = 33/187 (17%)

Query: 76  NTLAQLLAKAERVSSHANAAQERAVRRAAQVQRLEANHGLLVARGKLHVLLFKEEGEVPA 135
           N L +L  K +  +  AN  +   +   A   R  A +GL   R + H L        P 
Sbjct: 21  NGLKKLKRKGKEPARRANGYKTFRLDLEAPEPRAVATNGL---RDRTHRLQ-------PV 70

Query: 136 SAFQKAPEPLGPADQSELGPEQLEAEVGESSDEEPVESRAQRLRRTGLQKVQSLRRALSG 195
                 P P+ PA     G +      GE       E    R R   L           G
Sbjct: 71  PVPVPVPVPVAPAVPPRGGTDT----AGERGGSRAPEVSDARKRCFAL-----------G 115

Query: 196 RKGPAAPPPTPVKPPRLGPGRSAEAQPEAQPALEPTLEPE------PPQDTEEDPGRPGA 249
             GP  P P P  PP   P   A   PEAQP  EP L P       P +     P  P A
Sbjct: 116 AVGPGLPTPPPPPPP--APQSQAPGGPEAQPFREPGLRPRILLCAPPARPAPSAPPAPPA 173

Query: 250 AEEALLQ 256
             E+ ++
Sbjct: 174 PPESTVR 180


>gi|90903231 huntingtin [Homo sapiens]
          Length = 3144

 Score = 39.7 bits (91), Expect = 0.003
 Identities = 27/86 (31%), Positives = 42/86 (48%), Gaps = 10/86 (11%)

Query: 169 EPVESRAQRLRRTGLQKVQSLRRALSGRKGPAAPPPTPVKPPRLGPGRSAEAQPEAQPAL 228
           E ++S  Q+ ++   Q+ Q  ++    ++ P  PPP P  PP+L      +  P+AQP L
Sbjct: 12  ESLKSFQQQQQQQQQQQQQQQQQQQQQQQPPPPPPPPP--PPQL-----PQPPPQAQPLL 64

Query: 229 EPTLEPEPPQDTEEDPGRPGAAEEAL 254
               +P+PP      P  P  AEE L
Sbjct: 65  P---QPQPPPPPPPPPPGPAVAEEPL 87


>gi|19718731 bromodomain-containing protein 4 isoform long [Homo
           sapiens]
          Length = 1362

 Score = 39.7 bits (91), Expect = 0.003
 Identities = 44/149 (29%), Positives = 62/149 (41%), Gaps = 17/149 (11%)

Query: 112 NHGLLVARGKLHVLLFKEEGEVPASAFQKAPEPLGPA------DQSELGPEQLEAEVGES 165
           N   +V+   LH  L ++       A    P+P  P        Q+ L P+   A+  + 
Sbjct: 852 NQHAVVSPPALHNALPQQPSRPSNRAAALPPKPARPPAVSPALTQTPLLPQPPMAQPPQV 911

Query: 166 --SDEEP----VESRAQRLRRTGLQKVQSLRRALSGRKGPAAPPPTPVKPPRLGPGRSAE 219
              DEEP    + S   +L    LQKVQ     L   K  + PPP  + PP   P  S +
Sbjct: 912 LLEDEEPPAPPLTSMQMQLYLQQLQKVQPPTPLLPSVKVQSQPPPP-LPPP---PHPSVQ 967

Query: 220 AQPEAQPALEPTLEPE-PPQDTEEDPGRP 247
            Q + QP   P  +P+ PPQ   + P RP
Sbjct: 968 QQLQQQPPPPPPPQPQPPPQQQHQPPPRP 996


>gi|55750053 atrophin-1 [Homo sapiens]
          Length = 1190

 Score = 39.7 bits (91), Expect = 0.003
 Identities = 45/174 (25%), Positives = 71/174 (40%), Gaps = 17/174 (9%)

Query: 89  SSHANAAQERAVRRAAQVQRLEANHGLLVARGKLHVLLFKEEGEVPA----SAFQKAPEP 144
           SS   A + R   + A+V+  EA+   +  +G+   +   E  E  A       Q+ P P
Sbjct: 42  SSDGKAEKSRQTAKKARVE--EASTPKVNKQGRSEEISESESEETNAPKKTKTEQELPRP 99

Query: 145 LGPADQSELGPEQLEAEVGESSDEEPVESRAQRLRRTGLQKVQSLRRALSG-RKGPAAP- 202
             P+D   L    L  +      +   ++R+          V++   + SG  +GPA P 
Sbjct: 100 QSPSDLDSLDGRSLNDDGSSDPRDIDQDNRSTSPSIYSPGSVENDSDSSSGLSQGPARPY 159

Query: 203 PPTPVKPPRLGPGRSAEAQPEA----QPALEPT-----LEPEPPQDTEEDPGRP 247
            P P+ PP   P  S   QPEA     P++ PT     +EP   +  +  PG P
Sbjct: 160 HPPPLFPPSPQPPDSTPRQPEASFEPHPSVTPTGYHAPMEPPTSRMFQAPPGAP 213



 Score = 28.1 bits (61), Expect = 8.1
 Identities = 17/54 (31%), Positives = 22/54 (40%)

Query: 184 QKVQSLRRALSGRKGPAAPPPTPVKPPRLGPGRSAEAQPEAQPALEPTLEPEPP 237
           Q+ Q  ++      G + PPP    P  L  G S  A P A      +L P PP
Sbjct: 491 QQQQQQQQQQQQHHGNSGPPPPGAFPHPLEGGSSHHAHPYAMSPSLGSLRPYPP 544


>gi|55750041 atrophin-1 [Homo sapiens]
          Length = 1190

 Score = 39.7 bits (91), Expect = 0.003
 Identities = 45/174 (25%), Positives = 71/174 (40%), Gaps = 17/174 (9%)

Query: 89  SSHANAAQERAVRRAAQVQRLEANHGLLVARGKLHVLLFKEEGEVPA----SAFQKAPEP 144
           SS   A + R   + A+V+  EA+   +  +G+   +   E  E  A       Q+ P P
Sbjct: 42  SSDGKAEKSRQTAKKARVE--EASTPKVNKQGRSEEISESESEETNAPKKTKTEQELPRP 99

Query: 145 LGPADQSELGPEQLEAEVGESSDEEPVESRAQRLRRTGLQKVQSLRRALSG-RKGPAAP- 202
             P+D   L    L  +      +   ++R+          V++   + SG  +GPA P 
Sbjct: 100 QSPSDLDSLDGRSLNDDGSSDPRDIDQDNRSTSPSIYSPGSVENDSDSSSGLSQGPARPY 159

Query: 203 PPTPVKPPRLGPGRSAEAQPEA----QPALEPT-----LEPEPPQDTEEDPGRP 247
            P P+ PP   P  S   QPEA     P++ PT     +EP   +  +  PG P
Sbjct: 160 HPPPLFPPSPQPPDSTPRQPEASFEPHPSVTPTGYHAPMEPPTSRMFQAPPGAP 213



 Score = 28.1 bits (61), Expect = 8.1
 Identities = 17/54 (31%), Positives = 22/54 (40%)

Query: 184 QKVQSLRRALSGRKGPAAPPPTPVKPPRLGPGRSAEAQPEAQPALEPTLEPEPP 237
           Q+ Q  ++      G + PPP    P  L  G S  A P A      +L P PP
Sbjct: 491 QQQQQQQQQQQQHHGNSGPPPPGAFPHPLEGGSSHHAHPYAMSPSLGSLRPYPP 544


>gi|5174573 myeloid/lymphoid or mixed-lineage leukemia trithorax
           homolog 2 [Homo sapiens]
          Length = 1210

 Score = 39.7 bits (91), Expect = 0.003
 Identities = 36/130 (27%), Positives = 51/130 (39%), Gaps = 15/130 (11%)

Query: 134 PASAFQKAPEPLGPADQSELGPE-----------QLEAEVGESSDEEPVESRAQRLRRTG 182
           P SA Q  PEP+  A  S    E           + E+   +S + EP+E+ A       
Sbjct: 450 PPSAPQSLPEPVASAHSSSAESESTSDSDSSSDSESESSSSDSEENEPLETPAPEPEPPT 509

Query: 183 LQKVQSLRRALSGRKGPAAPP--PTPVKPPRLGPGRSAEAQPEAQPALEPTLEPEPPQDT 240
             K Q L   L+    PAAPP  P   +PPR  P     +          + +P PP+ +
Sbjct: 510 TNKWQ-LDNWLTKVSQPAAPPEGPRSTEPPRRHPESKGSSDSATSQEHSESKDP-PPKSS 567

Query: 241 EEDPGRPGAA 250
            + P  P  A
Sbjct: 568 SKAPRAPPEA 577


>gi|114431244 von Willebrand factor C and EGF domains [Homo sapiens]
          Length = 955

 Score = 39.7 bits (91), Expect = 0.003
 Identities = 34/97 (35%), Positives = 39/97 (40%), Gaps = 12/97 (12%)

Query: 165 SSDEEPVESRAQRLRRTGLQKVQSLRRALSGRKGP--------AAPPPTPVKPPRLGPGR 216
           +S   PV    Q L RT L K Q+L  + +G  GP        A  P  P   PRL PG 
Sbjct: 789 ASPSRPVLHLLQLLLRTNLMKTQTLPTSPAGAHGPHSLALGLTATFPGEPGASPRLSPGP 848

Query: 217 SAEAQPEAQPALEPTLEPEPPQDTEEDPGRPGAAEEA 253
           S    P   P L P   P  PQ     P R  +A  A
Sbjct: 849 ST---PPGAPTL-PLASPGAPQPPPVTPERSFSASGA 881


>gi|85815829 SH3-domain binding protein 1 [Homo sapiens]
          Length = 701

 Score = 39.7 bits (91), Expect = 0.003
 Identities = 42/152 (27%), Positives = 58/152 (38%), Gaps = 27/152 (17%)

Query: 134 PASAFQKAPEP-LGPA-----DQSELGPEQLEAEVGESSDEE--PVESRAQRLRRTGLQK 185
           PA A   AP P L  A      +SE+ P     +V  S  E   PVE  A+R +R    +
Sbjct: 513 PAPAPAPAPAPALASAATKERTESEVPPRPASPKVTRSPPETAAPVEDMARRTKRPAPAR 572

Query: 186 VQSLRRALSGRKGPAAPPPTPVKPPRLGPGRSAEAQPE-------AQPALEPTLEPEPPQ 238
                  +SG +   + PP P  PP  G   + +A P          P + P L P PPQ
Sbjct: 573 PTMPPPQVSGSR---SSPPAPPLPPGSGSPGTPQALPRRLVGSSLRAPTVPPPLPPTPPQ 629

Query: 239 DTEE---------DPGRPGAAEEALLQMESVA 261
                         P  PG A  + + + + A
Sbjct: 630 PARRQSRRSPASPSPASPGPASPSPVSLSNPA 661


>gi|41322923 plectin 1 isoform 11 [Homo sapiens]
          Length = 4547

 Score = 39.3 bits (90), Expect = 0.003
 Identities = 56/238 (23%), Positives = 92/238 (38%), Gaps = 35/238 (14%)

Query: 27   TLLEKLASMLETLRERQGGLARRQGGLAGSVRRIQSGLGA---LSRSHDTTSNTLAQLLA 83
            TL  K  + LE  R+RQ   A  +     +  R+Q  L A    +R        + +L A
Sbjct: 1958 TLRSKEQAELEAARQRQLA-AEEERRRREAEERVQKSLAAEEEAARQRKAALEEVERLKA 2016

Query: 84   KAERVSSHANAAQERAVRRAAQVQRLEANHGLLVARGKLHVLLFKEEGEVPASAFQKAPE 143
            K E        A++ + R+    Q  EA    L A  K H    +++ +      Q+   
Sbjct: 2017 KVEEARRLRERAEQESARQLQLAQ--EAAQKRLQAEEKAHAFAVQQKEQELQQTLQQ--- 2071

Query: 144  PLGPADQSELGPEQLEAEVGESSDEEPVESRAQRLRRTGLQKVQSLRRALSGRKGPAAPP 203
                 +QS L   + EAE    + EE  E+R Q  R    +  QS R+     +      
Sbjct: 2072 -----EQSVLDQLRGEAEAARRAAEEAEEARVQAER----EAAQSRRQVEEAER------ 2116

Query: 204  PTPVKPPRLGPGRSAEAQPEAQPALEPTLEPEPPQDTEEDPGRPGAAEEALLQMESVA 261
                   +      A+A+ +AQ A E     +  ++ E++  R   AE+A L+ +  A
Sbjct: 2117 ------LKQSAEEQAQARAQAQAAAE-----KLRKEAEQEAARRAQAEQAALRQKQAA 2163



 Score = 33.9 bits (76), Expect = 0.15
 Identities = 52/211 (24%), Positives = 71/211 (33%), Gaps = 18/211 (8%)

Query: 57   VRRIQSGLGALSRSHDTTSNTLAQLLAKAERVSSHANAAQERAVRRAAQVQRLEANHGLL 116
            +R ++  L A  R        L  L A+AE   +    AQE A R   QVQ         
Sbjct: 1454 IRVVRLQLEATERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQA 1513

Query: 117  VARGKLHVLLFKEEGEVPASAFQKAPEPLGPADQSELGPEQLEAE------VGESSDEEP 170
                   V    E       A Q   E    A+++E    Q E E      V   + +  
Sbjct: 1514 EVELASRVKAEAEAAREKQRALQALEELRLQAEEAERRLRQAEVERARQVQVALETAQRS 1573

Query: 171  VESRAQRLRRTGLQKVQSLRRALSGRKGPAAPPPTPVKPPRLGPGRSAEAQPEAQPALEP 230
             E+  Q  R +  +K   L R+L             V   R    R A+ Q EA+ A E 
Sbjct: 1574 AEAELQSKRASFAEKTAQLERSLQEEH-------VAVAQLREEAERRAQQQAEAERARE- 1625

Query: 231  TLEPEPPQDTEEDPGRPGAAEEALLQMESVA 261
                E  ++ E    +   A    LQ E VA
Sbjct: 1626 ----EAERELERWQLKANEALRLRLQAEEVA 1652



 Score = 28.1 bits (61), Expect = 8.1
 Identities = 40/148 (27%), Positives = 50/148 (33%), Gaps = 29/148 (19%)

Query: 48   RRQGGLAGSVRRIQSGLGALSRSHDTTSNTLAQLLAKAERVSSHANAAQERAVRRAAQVQ 107
            RRQ      VRR Q  L  L +        LA                 E   R   Q+Q
Sbjct: 2557 RRQHEAEEGVRRKQEELQQLEQQRRQQEELLA-----------------EENQRLREQLQ 2599

Query: 108  RLEANHGLLVARGKLHVLLFKEEGEVPASAFQKAPEPLGPADQSELGPEQLEAEVGESSD 167
             LE  H   +A  +          EV AS  Q A     P  +  L     EAE   S D
Sbjct: 2600 LLEEQHRAALAHSE----------EVTAS--QVAATKTLPNGRDALDGPAAEAEPEHSFD 2647

Query: 168  EEPVESRAQRLRRTGLQKVQSLRRALSG 195
                +  AQRL+  G+   + L+R   G
Sbjct: 2648 GLRRKVSAQRLQEAGILSAEELQRLAQG 2675


>gi|41322914 plectin 1 isoform 10 [Homo sapiens]
          Length = 4551

 Score = 39.3 bits (90), Expect = 0.003
 Identities = 56/238 (23%), Positives = 92/238 (38%), Gaps = 35/238 (14%)

Query: 27   TLLEKLASMLETLRERQGGLARRQGGLAGSVRRIQSGLGA---LSRSHDTTSNTLAQLLA 83
            TL  K  + LE  R+RQ   A  +     +  R+Q  L A    +R        + +L A
Sbjct: 1962 TLRSKEQAELEAARQRQLA-AEEERRRREAEERVQKSLAAEEEAARQRKAALEEVERLKA 2020

Query: 84   KAERVSSHANAAQERAVRRAAQVQRLEANHGLLVARGKLHVLLFKEEGEVPASAFQKAPE 143
            K E        A++ + R+    Q  EA    L A  K H    +++ +      Q+   
Sbjct: 2021 KVEEARRLRERAEQESARQLQLAQ--EAAQKRLQAEEKAHAFAVQQKEQELQQTLQQ--- 2075

Query: 144  PLGPADQSELGPEQLEAEVGESSDEEPVESRAQRLRRTGLQKVQSLRRALSGRKGPAAPP 203
                 +QS L   + EAE    + EE  E+R Q  R    +  QS R+     +      
Sbjct: 2076 -----EQSVLDQLRGEAEAARRAAEEAEEARVQAER----EAAQSRRQVEEAER------ 2120

Query: 204  PTPVKPPRLGPGRSAEAQPEAQPALEPTLEPEPPQDTEEDPGRPGAAEEALLQMESVA 261
                   +      A+A+ +AQ A E     +  ++ E++  R   AE+A L+ +  A
Sbjct: 2121 ------LKQSAEEQAQARAQAQAAAE-----KLRKEAEQEAARRAQAEQAALRQKQAA 2167



 Score = 33.9 bits (76), Expect = 0.15
 Identities = 52/211 (24%), Positives = 71/211 (33%), Gaps = 18/211 (8%)

Query: 57   VRRIQSGLGALSRSHDTTSNTLAQLLAKAERVSSHANAAQERAVRRAAQVQRLEANHGLL 116
            +R ++  L A  R        L  L A+AE   +    AQE A R   QVQ         
Sbjct: 1458 IRVVRLQLEATERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQA 1517

Query: 117  VARGKLHVLLFKEEGEVPASAFQKAPEPLGPADQSELGPEQLEAE------VGESSDEEP 170
                   V    E       A Q   E    A+++E    Q E E      V   + +  
Sbjct: 1518 EVELASRVKAEAEAAREKQRALQALEELRLQAEEAERRLRQAEVERARQVQVALETAQRS 1577

Query: 171  VESRAQRLRRTGLQKVQSLRRALSGRKGPAAPPPTPVKPPRLGPGRSAEAQPEAQPALEP 230
             E+  Q  R +  +K   L R+L             V   R    R A+ Q EA+ A E 
Sbjct: 1578 AEAELQSKRASFAEKTAQLERSLQEEH-------VAVAQLREEAERRAQQQAEAERARE- 1629

Query: 231  TLEPEPPQDTEEDPGRPGAAEEALLQMESVA 261
                E  ++ E    +   A    LQ E VA
Sbjct: 1630 ----EAERELERWQLKANEALRLRLQAEEVA 1656



 Score = 28.1 bits (61), Expect = 8.1
 Identities = 40/148 (27%), Positives = 50/148 (33%), Gaps = 29/148 (19%)

Query: 48   RRQGGLAGSVRRIQSGLGALSRSHDTTSNTLAQLLAKAERVSSHANAAQERAVRRAAQVQ 107
            RRQ      VRR Q  L  L +        LA                 E   R   Q+Q
Sbjct: 2561 RRQHEAEEGVRRKQEELQQLEQQRRQQEELLA-----------------EENQRLREQLQ 2603

Query: 108  RLEANHGLLVARGKLHVLLFKEEGEVPASAFQKAPEPLGPADQSELGPEQLEAEVGESSD 167
             LE  H   +A  +          EV AS  Q A     P  +  L     EAE   S D
Sbjct: 2604 LLEEQHRAALAHSE----------EVTAS--QVAATKTLPNGRDALDGPAAEAEPEHSFD 2651

Query: 168  EEPVESRAQRLRRTGLQKVQSLRRALSG 195
                +  AQRL+  G+   + L+R   G
Sbjct: 2652 GLRRKVSAQRLQEAGILSAEELQRLAQG 2679


>gi|41322919 plectin 1 isoform 8 [Homo sapiens]
          Length = 4547

 Score = 39.3 bits (90), Expect = 0.003
 Identities = 56/238 (23%), Positives = 92/238 (38%), Gaps = 35/238 (14%)

Query: 27   TLLEKLASMLETLRERQGGLARRQGGLAGSVRRIQSGLGA---LSRSHDTTSNTLAQLLA 83
            TL  K  + LE  R+RQ   A  +     +  R+Q  L A    +R        + +L A
Sbjct: 1958 TLRSKEQAELEAARQRQLA-AEEERRRREAEERVQKSLAAEEEAARQRKAALEEVERLKA 2016

Query: 84   KAERVSSHANAAQERAVRRAAQVQRLEANHGLLVARGKLHVLLFKEEGEVPASAFQKAPE 143
            K E        A++ + R+    Q  EA    L A  K H    +++ +      Q+   
Sbjct: 2017 KVEEARRLRERAEQESARQLQLAQ--EAAQKRLQAEEKAHAFAVQQKEQELQQTLQQ--- 2071

Query: 144  PLGPADQSELGPEQLEAEVGESSDEEPVESRAQRLRRTGLQKVQSLRRALSGRKGPAAPP 203
                 +QS L   + EAE    + EE  E+R Q  R    +  QS R+     +      
Sbjct: 2072 -----EQSVLDQLRGEAEAARRAAEEAEEARVQAER----EAAQSRRQVEEAER------ 2116

Query: 204  PTPVKPPRLGPGRSAEAQPEAQPALEPTLEPEPPQDTEEDPGRPGAAEEALLQMESVA 261
                   +      A+A+ +AQ A E     +  ++ E++  R   AE+A L+ +  A
Sbjct: 2117 ------LKQSAEEQAQARAQAQAAAE-----KLRKEAEQEAARRAQAEQAALRQKQAA 2163



 Score = 33.9 bits (76), Expect = 0.15
 Identities = 52/211 (24%), Positives = 71/211 (33%), Gaps = 18/211 (8%)

Query: 57   VRRIQSGLGALSRSHDTTSNTLAQLLAKAERVSSHANAAQERAVRRAAQVQRLEANHGLL 116
            +R ++  L A  R        L  L A+AE   +    AQE A R   QVQ         
Sbjct: 1454 IRVVRLQLEATERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQA 1513

Query: 117  VARGKLHVLLFKEEGEVPASAFQKAPEPLGPADQSELGPEQLEAE------VGESSDEEP 170
                   V    E       A Q   E    A+++E    Q E E      V   + +  
Sbjct: 1514 EVELASRVKAEAEAAREKQRALQALEELRLQAEEAERRLRQAEVERARQVQVALETAQRS 1573

Query: 171  VESRAQRLRRTGLQKVQSLRRALSGRKGPAAPPPTPVKPPRLGPGRSAEAQPEAQPALEP 230
             E+  Q  R +  +K   L R+L             V   R    R A+ Q EA+ A E 
Sbjct: 1574 AEAELQSKRASFAEKTAQLERSLQEEH-------VAVAQLREEAERRAQQQAEAERARE- 1625

Query: 231  TLEPEPPQDTEEDPGRPGAAEEALLQMESVA 261
                E  ++ E    +   A    LQ E VA
Sbjct: 1626 ----EAERELERWQLKANEALRLRLQAEEVA 1652



 Score = 28.1 bits (61), Expect = 8.1
 Identities = 40/148 (27%), Positives = 50/148 (33%), Gaps = 29/148 (19%)

Query: 48   RRQGGLAGSVRRIQSGLGALSRSHDTTSNTLAQLLAKAERVSSHANAAQERAVRRAAQVQ 107
            RRQ      VRR Q  L  L +        LA                 E   R   Q+Q
Sbjct: 2557 RRQHEAEEGVRRKQEELQQLEQQRRQQEELLA-----------------EENQRLREQLQ 2599

Query: 108  RLEANHGLLVARGKLHVLLFKEEGEVPASAFQKAPEPLGPADQSELGPEQLEAEVGESSD 167
             LE  H   +A  +          EV AS  Q A     P  +  L     EAE   S D
Sbjct: 2600 LLEEQHRAALAHSE----------EVTAS--QVAATKTLPNGRDALDGPAAEAEPEHSFD 2647

Query: 168  EEPVESRAQRLRRTGLQKVQSLRRALSG 195
                +  AQRL+  G+   + L+R   G
Sbjct: 2648 GLRRKVSAQRLQEAGILSAEELQRLAQG 2675


>gi|41322910 plectin 1 isoform 7 [Homo sapiens]
          Length = 4515

 Score = 39.3 bits (90), Expect = 0.003
 Identities = 56/238 (23%), Positives = 92/238 (38%), Gaps = 35/238 (14%)

Query: 27   TLLEKLASMLETLRERQGGLARRQGGLAGSVRRIQSGLGA---LSRSHDTTSNTLAQLLA 83
            TL  K  + LE  R+RQ   A  +     +  R+Q  L A    +R        + +L A
Sbjct: 1926 TLRSKEQAELEAARQRQLA-AEEERRRREAEERVQKSLAAEEEAARQRKAALEEVERLKA 1984

Query: 84   KAERVSSHANAAQERAVRRAAQVQRLEANHGLLVARGKLHVLLFKEEGEVPASAFQKAPE 143
            K E        A++ + R+    Q  EA    L A  K H    +++ +      Q+   
Sbjct: 1985 KVEEARRLRERAEQESARQLQLAQ--EAAQKRLQAEEKAHAFAVQQKEQELQQTLQQ--- 2039

Query: 144  PLGPADQSELGPEQLEAEVGESSDEEPVESRAQRLRRTGLQKVQSLRRALSGRKGPAAPP 203
                 +QS L   + EAE    + EE  E+R Q  R    +  QS R+     +      
Sbjct: 2040 -----EQSVLDQLRGEAEAARRAAEEAEEARVQAER----EAAQSRRQVEEAER------ 2084

Query: 204  PTPVKPPRLGPGRSAEAQPEAQPALEPTLEPEPPQDTEEDPGRPGAAEEALLQMESVA 261
                   +      A+A+ +AQ A E     +  ++ E++  R   AE+A L+ +  A
Sbjct: 2085 ------LKQSAEEQAQARAQAQAAAE-----KLRKEAEQEAARRAQAEQAALRQKQAA 2131



 Score = 33.9 bits (76), Expect = 0.15
 Identities = 52/211 (24%), Positives = 71/211 (33%), Gaps = 18/211 (8%)

Query: 57   VRRIQSGLGALSRSHDTTSNTLAQLLAKAERVSSHANAAQERAVRRAAQVQRLEANHGLL 116
            +R ++  L A  R        L  L A+AE   +    AQE A R   QVQ         
Sbjct: 1422 IRVVRLQLEATERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQA 1481

Query: 117  VARGKLHVLLFKEEGEVPASAFQKAPEPLGPADQSELGPEQLEAE------VGESSDEEP 170
                   V    E       A Q   E    A+++E    Q E E      V   + +  
Sbjct: 1482 EVELASRVKAEAEAAREKQRALQALEELRLQAEEAERRLRQAEVERARQVQVALETAQRS 1541

Query: 171  VESRAQRLRRTGLQKVQSLRRALSGRKGPAAPPPTPVKPPRLGPGRSAEAQPEAQPALEP 230
             E+  Q  R +  +K   L R+L             V   R    R A+ Q EA+ A E 
Sbjct: 1542 AEAELQSKRASFAEKTAQLERSLQEEH-------VAVAQLREEAERRAQQQAEAERARE- 1593

Query: 231  TLEPEPPQDTEEDPGRPGAAEEALLQMESVA 261
                E  ++ E    +   A    LQ E VA
Sbjct: 1594 ----EAERELERWQLKANEALRLRLQAEEVA 1620



 Score = 28.1 bits (61), Expect = 8.1
 Identities = 40/148 (27%), Positives = 50/148 (33%), Gaps = 29/148 (19%)

Query: 48   RRQGGLAGSVRRIQSGLGALSRSHDTTSNTLAQLLAKAERVSSHANAAQERAVRRAAQVQ 107
            RRQ      VRR Q  L  L +        LA                 E   R   Q+Q
Sbjct: 2525 RRQHEAEEGVRRKQEELQQLEQQRRQQEELLA-----------------EENQRLREQLQ 2567

Query: 108  RLEANHGLLVARGKLHVLLFKEEGEVPASAFQKAPEPLGPADQSELGPEQLEAEVGESSD 167
             LE  H   +A  +          EV AS  Q A     P  +  L     EAE   S D
Sbjct: 2568 LLEEQHRAALAHSE----------EVTAS--QVAATKTLPNGRDALDGPAAEAEPEHSFD 2615

Query: 168  EEPVESRAQRLRRTGLQKVQSLRRALSG 195
                +  AQRL+  G+   + L+R   G
Sbjct: 2616 GLRRKVSAQRLQEAGILSAEELQRLAQG 2643


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.309    0.127    0.349 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,818,659
Number of Sequences: 37866
Number of extensions: 684980
Number of successful extensions: 9788
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 246
Number of HSP's successfully gapped in prelim test: 777
Number of HSP's that attempted gapping in prelim test: 6543
Number of HSP's gapped (non-prelim): 3431
length of query: 261
length of database: 18,247,518
effective HSP length: 100
effective length of query: 161
effective length of database: 14,460,918
effective search space: 2328207798
effective search space used: 2328207798
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.