Guide to the Human Genome
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Name: EPN1 Sequence: fasta or formatted (576aa) NCBI GI: 194248095
Description:

epsin 1 isoform b

Referenced in:

Additional Membrane Functions

Other entries for this name:
alt prot [662aa] epsin 1 isoform a
alt prot [550aa] epsin 1 isoform c
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.6         67           3
 C cysteine            0.3          2           1
 D aspartate           5.7         33           2
 E glutamate           6.6         38           3
 F phenylalanine       2.1         12           1
 G glycine             9.2         53           3
 H histidine           0.9          5           1
 I isoleucine          1.6          9           1
 K lysine              3.6         21           1
 L leucine             7.6         44           2
 M methionine          2.6         15           2
 N asparagine          2.6         15           1
 P proline            14.8         85           3
 Q glutamine           3.1         18           2
 R arginine            4.5         26           2
 S serine              8.9         51           3
 T threonine           6.4         37           2
 V valine              4.5         26           2
 W tryptophan          2.1         12           1
 Y tyrosine            1.2          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   epsin 1 isoform b 
EPN1                  0.938   epsin 1 isoform c 
EPN1                  0.937   epsin 1 isoform a 
EPN2                  0.375   epsin 2 isoform a 
EPN2                  0.374   epsin 2 isoform b 
EPN3                  0.362   epsin 3 
ENTHD1                0.160   ENTH domain containing 1 
EPN2                  0.137   epsin 2 isoform c 
CLINT1                0.128   epsin 4 
NACA                  0.058   nascent polypeptide-associated complex alpha subuni...
MLL2                  0.046   myeloid/lymphoid or mixed-lineage leukemia 2 
TAF4                  0.042   TBP-associated factor 4 
SETD1B                0.041   SET domain containing 1B 
TPRX1                 0.041   tetra-peptide repeat homeobox 
FLJ22184              0.040   PREDICTED: hypothetical protein LOC80164 
MUC2                  0.040   mucin 2 precursor 
FLJ22184              0.040   PREDICTED: hypothetical protein FLJ22184 
SRCAP                 0.040   Snf2-related CBP activator protein 
KIAA0754              0.039   hypothetical protein LOC643314 
LMTK3                 0.038   lemur tyrosine kinase 3 
MAPK1IP1L             0.038   MAPK-interacting and spindle-stabilizing protein [Ho...
SF1                   0.038   splicing factor 1 isoform 1 
PRG4                  0.036   proteoglycan 4 isoform D 
PRG4                  0.036   proteoglycan 4 isoform C 
PRG4                  0.036   proteoglycan 4 isoform B 
PRG4                  0.036   proteoglycan 4 isoform A 
PRB2                  0.036   proline-rich protein BstNI subfamily 2 
SF1                   0.036   splicing factor 1 isoform 2 
SMARCA4               0.036   SWI/SNF-related matrix-associated actin-dependent r...
SMARCA4               0.036   SWI/SNF-related matrix-associated actin-dependent r...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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