VGF 9511

Name: VGF	Sequence: fasta or formatted (615aa)		NCBI GI: 17136078
Description: VGF nerve growth factor inducible precursor		Referenced in: Additional Brain Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 13.5 83 3 C cysteine 0.2 1 1 D aspartate 3.7 23 2 E glutamate 15.8 97 4 F phenylalanine 1.5 9 1 G glycine 6.7 41 2 H histidine 2.3 14 2 I isoleucine 1.1 7 2 K lysine 2.4 15 2 L leucine 9.3 57 3 M methionine 0.5 3 1 N asparagine 1.5 9 1 P proline 12.5 77 4 Q glutamine 5.7 35 2 R arginine 9.1 56 3 S serine 5.9 36 2 T threonine 3.1 19 1 V valine 3.4 21 2 W tryptophan 0.7 4 1 Y tyrosine 1.3 8 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 VGF nerve growth factor inducible precursor NEFH 0.041 neurofilament, heavy polypeptide 200kDa RP1L1 0.037 retinitis pigmentosa 1-like 1 RPGR 0.035 retinitis pigmentosa GTPase regulator isoform C [Hom... SETD1A 0.033 SET domain containing 1A PELP1 0.032 proline, glutamic acid and leucine rich protein 1 [... INCENP 0.032 inner centromere protein antigens 135/155kDa isofor... INCENP 0.031 inner centromere protein antigens 135/155kDa isofor... NEFM 0.031 neurofilament, medium polypeptide 150kDa isoform 1 ... NEFM 0.031 neurofilament, medium polypeptide 150kDa isoform 2 ... MAP7D1 0.031 MAP7 domain containing 1 GIGYF2 0.029 GRB10 interacting GYF protein 2 isoform c GIGYF2 0.029 GRB10 interacting GYF protein 2 isoform a GIGYF2 0.029 GRB10 interacting GYF protein 2 isoform b GIGYF2 0.029 GRB10 interacting GYF protein 2 isoform b TBKBP1 0.028 TBK1 binding protein 1 CCDC88B 0.027 coiled-coil domain containing 88 SAMD1 0.027 sterile alpha motif domain containing 1 PLEC1 0.026 plectin 1 isoform 11 PLEC1 0.026 plectin 1 isoform 10 PLEC1 0.026 plectin 1 isoform 8 PLEC1 0.026 plectin 1 isoform 7 PLEC1 0.026 plectin 1 isoform 6 PLEC1 0.026 plectin 1 isoform 3 PLEC1 0.026 plectin 1 isoform 2 PLEC1 0.026 plectin 1 isoform 1 MAP7 0.026 microtubule-associated protein 7 ENAH 0.025 enabled homolog isoform a ENAH 0.025 enabled homolog isoform b NEFL 0.025 neurofilament, light polypeptide 68kDa Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.