PLEC1 27724

Name: PLEC1	Sequence: fasta or formatted (4547aa)		NCBI GI: 41322923
Description: plectin 1 isoform 11		Referenced in: Ribosomes Spectrin and Plectin Families
Other entries for this name: alt prot [4525aa] plectin 1 isoform 3 alt prot [4515aa] plectin 1 isoform 7 alt prot [4533aa] plectin 1 isoform 2 alt prot [4551aa] plectin 1 isoform 10 alt prot [4684aa] plectin 1 isoform 6 alt prot [4547aa] plectin 1 isoform 8 alt prot [4574aa] plectin 1 isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 11.2 507 4 C cysteine 0.7 34 3 D aspartate 4.2 191 2 E glutamate 12.8 581 4 F phenylalanine 2.0 89 2 G glycine 5.0 228 3 H histidine 1.6 75 2 I isoleucine 3.2 147 5 K lysine 5.4 245 2 L leucine 12.0 545 4 M methionine 1.3 59 1 N asparagine 1.3 60 1 P proline 2.7 125 3 Q glutamine 8.6 389 4 R arginine 9.6 435 4 S serine 5.7 258 4 T threonine 4.5 204 2 V valine 5.5 249 2 W tryptophan 0.7 30 1 Y tyrosine 2.1 96 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 plectin 1 isoform 11 PLEC1 0.992 plectin 1 isoform 2 PLEC1 0.992 plectin 1 isoform 8 PLEC1 0.992 plectin 1 isoform 3 PLEC1 0.992 plectin 1 isoform 10 PLEC1 0.992 plectin 1 isoform 7 PLEC1 0.992 plectin 1 isoform 6 PLEC1 0.992 plectin 1 isoform 1 LOC652460 0.269 PREDICTED: similar to plectin 1, partial MACF1 0.156 microfilament and actin filament cross-linker protei... EPPK1 0.143 epiplakin 1 DSP 0.108 desmoplakin isoform II DSP 0.108 desmoplakin isoform I DST 0.103 dystonin isoform 1e precursor DST 0.096 dystonin isoform 4 DST 0.096 dystonin isoform 3 DST 0.096 dystonin isoform 2 DST 0.096 dystonin isoform 1 DST 0.096 dystonin isoform 1eA precursor DST 0.088 dystonin isoform 1eB precursor SPTBN2 0.046 spectrin, beta, non-erythrocytic 2 PPL 0.045 periplakin SPTBN1 0.043 spectrin, beta, non-erythrocytic 1 isoform 1 SPTBN1 0.043 spectrin, beta, non-erythrocytic 1 isoform 2 SPTB 0.040 spectrin beta isoform a SPTB 0.040 spectrin beta isoform b SPTBN5 0.038 spectrin, beta, non-erythrocytic 5 TCHH 0.038 trichohyalin EVPL 0.037 envoplakin SPTBN4 0.032 spectrin, beta, non-erythrocytic 4 isoform sigma1 [... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.