Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: MURC Sequence: fasta or formatted (364aa) NCBI GI: 66472922
Description:

muscle-related coiled-coil protein

Referenced in:

Muscle

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.2         19           2
 C cysteine            0.5          2           1
 D aspartate           6.6         24           4
 E glutamate          11.8         43           2
 F phenylalanine       2.5          9           1
 G glycine             3.0         11           1
 H histidine           3.0         11           1
 I isoleucine          6.0         22           2
 K lysine             10.2         37           2
 L leucine             6.6         24           3
 M methionine          1.6          6           1
 N asparagine          3.8         14           1
 P proline             3.6         13           2
 Q glutamine           4.7         17           2
 R arginine            8.8         32           2
 S serine              9.9         36           2
 T threonine           3.6         13           1
 V valine              7.4         27           2
 W tryptophan          0.0          0           0
 Y tyrosine            1.1          4           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   muscle-related coiled-coil protein 
PTRF                  0.213   polymerase I and transcript release factor 
SDPR                  0.194   serum deprivation response protein 
PRKCDBP               0.085   protein kinase C, delta binding protein 
GOLGA6C               0.041   PREDICTED: golgi autoantigen, golgin subfamily a, 6C...
GOLGA6B               0.041   golgi autoantigen, golgin subfamily a, 6B 
GOLGA6                0.040   golgi autoantigen, golgin subfamily a, 6 
GOLGA6D               0.037   golgi autoantigen, golgin subfamily a, 6D 
FILIP1L               0.035   filamin A interacting protein 1-like isoform 3 [Hom...
FILIP1L               0.035   filamin A interacting protein 1-like isoform 1 [Hom...
ZRANB2                0.035   zinc finger protein 265 isoform 2 
CDC2L1                0.032   cell division cycle 2-like 1 (PITSLRE proteins) isof...
MYH2                  0.032   myosin, heavy chain 2, skeletal muscle, adult [Homo...
MYH2                  0.032   myosin, heavy chain 2, skeletal muscle, adult [Homo...
LOC283767             0.032   golgi autoantigen, golgin subfamily a-like 
CENPE                 0.032   centromere protein E 
CDC2L2                0.031   cell division cycle 2-like 2 isoform 1 
EEA1                  0.031   early endosome antigen 1, 162kD 
MYH13                 0.031   myosin, heavy polypeptide 13, skeletal muscle [Homo...
LOC100133220          0.029   PREDICTED: hypothetical protein 
ERBB2IP               0.029   ERBB2 interacting protein isoform 7 
ERBB2IP               0.029   ERBB2 interacting protein isoform 2 
ZRANB2                0.029   zinc finger protein 265 isoform 1 
LOC653061             0.029   PREDICTED: similar to Golgin subfamily A member 8-l...
CDC2L2                0.028   cell division cycle 2-like 2 isoform 4 
TCHH                  0.028   trichohyalin 
CDC2L1                0.028   cell division cycle 2-like 1 (PITSLRE proteins) isof...
LOC645202             0.028   PREDICTED: hypothetical protein LOC645202 
CDC2L1                0.028   cell division cycle 2-like 1 (PITSLRE proteins) isof...
MAP7D2                0.028   MAP7 domain containing 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press