C9orf16 3038

Name: C9orf16	Sequence: fasta or formatted (83aa)		NCBI GI: 13129128
Description: hypothetical protein LOC79095		Not currently referenced in the text
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.6 8 2 C cysteine 1.2 1 1 D aspartate 7.2 6 1 E glutamate 14.5 12 2 F phenylalanine 2.4 2 1 G glycine 9.6 8 1 H histidine 3.6 3 1 I isoleucine 2.4 2 1 K lysine 1.2 1 1 L leucine 12.0 10 2 M methionine 3.6 3 1 N asparagine 6.0 5 1 P proline 4.8 4 1 Q glutamine 7.2 6 3 R arginine 3.6 3 1 S serine 7.2 6 1 T threonine 1.2 1 1 V valine 1.2 1 1 W tryptophan 0.0 0 0 Y tyrosine 1.2 1 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 hypothetical protein LOC79095 CHUK 0.048 conserved helix-loop-helix ubiquitous kinase MRPS23 0.041 mitochondrial ribosomal protein S23 CEP290 0.034 centrosomal protein 290kDa RNF135 0.034 ring finger protein 135 isoform 1 TCHH 0.034 trichohyalin MAP7D2 0.027 MAP7 domain containing 2 APOLD1 0.027 apolipoprotein L domain containing 1 isoform 1 [Hom... APOLD1 0.027 apolipoprotein L domain containing 1 isoform 2 [Hom... PDE4DIP 0.021 phosphodiesterase 4D interacting protein isoform 1 ... TRIP11 0.021 thyroid hormone receptor interactor 11 CCDC88A 0.021 coiled-coil domain containing 88A isoform 2 COL6A1 0.021 collagen, type VI, alpha 1 precursor WTAP 0.021 Wilms' tumour 1-associating protein isoform 1 GRIPAP1 0.021 GRIP1 associated protein 1 isoform 2 GRIPAP1 0.021 GRIP1 associated protein 1 isoform 1 GOLGA6D 0.014 golgi autoantigen, golgin subfamily a, 6D SFTPD 0.014 pulmonary surfactant-associated protein D precursor ... GOLGA6C 0.014 PREDICTED: golgi autoantigen, golgin subfamily a, 6C... CASK 0.014 calcium/calmodulin-dependent serine protein kinase ... NIN 0.014 ninein isoform 4 NIN 0.014 ninein isoform 5 NIN 0.014 ninein isoform 1 NIN 0.014 ninein isoform 2 GOLGA6B 0.014 golgi autoantigen, golgin subfamily a, 6B KIF3C 0.014 kinesin family member 3C GOLGA6 0.014 golgi autoantigen, golgin subfamily a, 6 CCDC13 0.014 coiled-coil domain containing 13 COL1A2 0.014 alpha 2 type I collagen AKAP9 0.014 A-kinase anchor protein 9 isoform 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.