TRIP11 10533

Name: TRIP11	Sequence: fasta or formatted (1979aa)		NCBI GI: 190194412
Description: thyroid hormone receptor interactor 11		Referenced in: Partitioning and Organelles ER, Golgi, and the Secretory Pathway Thyroid and Thyroid Hormone Receptor
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.1 101 2 C cysteine 0.6 12 1 D aspartate 5.1 100 3 E glutamate 13.3 263 3 F phenylalanine 1.6 32 1 G glycine 2.9 58 3 H histidine 2.5 49 2 I isoleucine 5.1 100 2 K lysine 9.3 185 2 L leucine 13.0 257 3 M methionine 2.4 48 2 N asparagine 5.5 108 2 P proline 1.6 31 3 Q glutamine 9.2 183 3 R arginine 4.4 88 2 S serine 8.4 166 3 T threonine 4.3 85 2 V valine 4.4 88 2 W tryptophan 0.4 7 1 Y tyrosine 0.9 18 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 thyroid hormone receptor interactor 11 LOC341378 0.157 PREDICTED: similar to Thyroid hormone receptor inte... LOC341378 0.157 PREDICTED: similar to Thyroid hormone receptor inte... LOC341378 0.157 PREDICTED: hypothetical protein GOLGB1 0.056 golgi autoantigen, golgin subfamily b, macrogolgin ... CENPE 0.053 centromere protein E CEP250 0.052 centrosomal protein 2 GOLGA4 0.051 golgi autoantigen, golgin subfamily a, 4 TPR 0.047 nuclear pore complex-associated protein TPR EEA1 0.046 early endosome antigen 1, 162kD GCC2 0.046 GRIP and coiled-coil domain-containing 2 CENPF 0.045 centromere protein F NUMA1 0.044 nuclear mitotic apparatus protein 1 CEP290 0.043 centrosomal protein 290kDa MYH9 0.041 myosin, heavy polypeptide 9, non-muscle CCDC88A 0.041 coiled-coil domain containing 88A isoform 1 CCDC88A 0.041 coiled-coil domain containing 88A isoform 2 AKAP9 0.041 A-kinase anchor protein 9 isoform 2 AKAP9 0.041 A-kinase anchor protein 9 isoform 3 MYH11 0.041 smooth muscle myosin heavy chain 11 isoform SM1A [Ho... MYH11 0.041 smooth muscle myosin heavy chain 11 isoform SM1B [Ho... PLEC1 0.041 plectin 1 isoform 11 PLEC1 0.041 plectin 1 isoform 10 PLEC1 0.041 plectin 1 isoform 8 PLEC1 0.041 plectin 1 isoform 7 PLEC1 0.041 plectin 1 isoform 6 PLEC1 0.041 plectin 1 isoform 3 PLEC1 0.041 plectin 1 isoform 2 PLEC1 0.041 plectin 1 isoform 1 MYH11 0.040 smooth muscle myosin heavy chain 11 isoform SM2B [Ho... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.