Guide to the Human Genome
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Name: CHUK Sequence: fasta or formatted (745aa) NCBI GI: 62241001
Description:

conserved helix-loop-helix ubiquitous kinase

Referenced in:

MAP Kinase Pathways
NF-kappaB Pathway

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.6         34           2
 C cysteine            2.7         20           2
 D aspartate           4.7         35           1
 E glutamate           7.8         58           2
 F phenylalanine       2.4         18           2
 G glycine             5.9         44           2
 H histidine           3.6         27           2
 I isoleucine          6.6         49           2
 K lysine              6.8         51           3
 L leucine            12.2         91           2
 M methionine          3.4         25           2
 N asparagine          3.6         27           1
 P proline             4.3         32           2
 Q glutamine           5.2         39           2
 R arginine            4.3         32           2
 S serine              8.3         62           2
 T threonine           3.8         28           1
 V valine              5.2         39           2
 W tryptophan          1.6         12           1
 Y tyrosine            3.0         22           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   conserved helix-loop-helix ubiquitous kinase 
IKBKB                 0.475   inhibitor of nuclear factor kappa B kinase beta subu...
IKBKE                 0.073   IKK-related kinase epsilon 
ULK1                  0.070   Unc-51-like kinase 1 
TBK1                  0.069   TANK-binding kinase 1 
ULK2                  0.066   unc-51-like kinase 2 
ULK2                  0.066   unc-51-like kinase 2 
MARK1                 0.059   MAP/microtubule affinity-regulating kinase 1 
MARK3                 0.059   MAP/microtubule affinity-regulating kinase 3 isofor...
MARK3                 0.059   MAP/microtubule affinity-regulating kinase 3 isofor...
MARK3                 0.059   MAP/microtubule affinity-regulating kinase 3 isofor...
MARK3                 0.059   MAP/microtubule affinity-regulating kinase 3 isoform...
GRK6                  0.059   G protein-coupled receptor kinase 6 isoform C 
GRK6                  0.059   G protein-coupled receptor kinase 6 isoform A 
GRK6                  0.059   G protein-coupled receptor kinase 6 isoform B 
MARK4                 0.059   MAP/microtubule affinity-regulating kinase 4 
MARK2                 0.057   MAP/microtubule affinity-regulating kinase 2 isofor...
MARK2                 0.057   MAP/microtubule affinity-regulating kinase 2 isofor...
MARK2                 0.057   MAP/microtubule affinity-regulating kinase 2 isofor...
MARK2                 0.057   MAP/microtubule affinity-regulating kinase 2 isofor...
MARK2                 0.057   MAP/microtubule affinity-regulating kinase 2 isoform...
NEK5                  0.056   NIMA-related kinase 5 
CAMK1D                0.056   calcium/calmodulin-dependent protein kinase ID isofor...
CAMK1D                0.056   calcium/calmodulin-dependent protein kinase ID isofo...
GRK5                  0.056   G protein-coupled receptor kinase 5 
CAMK1                 0.055   calcium/calmodulin-dependent protein kinase I 
DAPK2                 0.055   death-associated kinase 2 
NUAK2                 0.055   NUAK family, SNF1-like kinase, 2 
MGC42105              0.055   serine/threonine-protein kinase NIM1 
PNCK                  0.055   pregnancy upregulated non-ubiquitously expressed Ca...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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