Guide to the Human Genome
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Name: GRIPAP1 Sequence: fasta or formatted (625aa) NCBI GI: 46593000
Description:

GRIP1 associated protein 1 isoform 2

Not currently referenced in the text

Other entries for this name:
alt prot {841aa} GRIP1 associated protein 1 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.8         55           3
 C cysteine            0.3          2           1
 D aspartate           3.8         24           2
 E glutamate          15.7         98           3
 F phenylalanine       1.4          9           1
 G glycine             3.8         24           2
 H histidine           1.4          9           1
 I isoleucine          1.8         11           1
 K lysine              8.6         54           3
 L leucine            13.8         86           2
 M methionine          1.9         12           1
 N asparagine          2.6         16           2
 P proline             1.8         11           2
 Q glutamine          10.7         67           4
 R arginine            7.7         48           2
 S serine              7.4         46           3
 T threonine           3.8         24           2
 V valine              3.2         20           1
 W tryptophan          0.5          3           1
 Y tyrosine            1.0          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   GRIP1 associated protein 1 isoform 2 
GRIPAP1               0.939   GRIP1 associated protein 1 isoform 1 
FAM184B               0.071   hypothetical protein LOC27146 
MYH3                  0.071   myosin, heavy chain 3, skeletal muscle, embryonic [H...
MYH11                 0.069   smooth muscle myosin heavy chain 11 isoform SM1A [Ho...
MYH11                 0.069   smooth muscle myosin heavy chain 11 isoform SM1B [Ho...
MYH11                 0.069   smooth muscle myosin heavy chain 11 isoform SM2B [Ho...
MYH11                 0.069   smooth muscle myosin heavy chain 11 isoform SM2A [Ho...
NUMA1                 0.069   nuclear mitotic apparatus protein 1 
MYH10                 0.068   myosin, heavy polypeptide 10, non-muscle 
GOLGA4                0.068   golgi autoantigen, golgin subfamily a, 4 
CEP250                0.067   centrosomal protein 2 
SYCP1                 0.065   synaptonemal complex protein 1 
CENPE                 0.065   centromere protein E 
EEA1                  0.064   early endosome antigen 1, 162kD 
PLEC1                 0.064   plectin 1 isoform 11 
PLEC1                 0.064   plectin 1 isoform 10 
PLEC1                 0.064   plectin 1 isoform 8 
PLEC1                 0.064   plectin 1 isoform 7 
PLEC1                 0.064   plectin 1 isoform 6 
PLEC1                 0.064   plectin 1 isoform 3 
PLEC1                 0.064   plectin 1 isoform 2 
PLEC1                 0.064   plectin 1 isoform 1 
TCHH                  0.064   trichohyalin 
MYH14                 0.064   myosin, heavy chain 14 isoform 1 
MYH14                 0.064   myosin, heavy chain 14 isoform 2 
MYH14                 0.064   myosin, heavy chain 14 isoform 3 
FAM184A               0.064   hypothetical protein LOC79632 isoform 1 
LOC283685             0.063   PREDICTED: golgi autoantigen, golgin subfamily a-li...
MYH9                  0.062   myosin, heavy polypeptide 9, non-muscle 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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