Guide to the Human Genome
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Name: GOLGA6 Sequence: fasta or formatted (693aa) NCBI GI: 146133848
Description:

golgi autoantigen, golgin subfamily a, 6

Referenced in:

ER, Golgi, and the Secretory Pathway

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.9         48           3
 C cysteine            0.7          5           1
 D aspartate           3.5         24           1
 E glutamate          15.3        106           4
 F phenylalanine       1.0          7           1
 G glycine             3.9         27           2
 H histidine           2.6         18           1
 I isoleucine          2.2         15           1
 K lysine              7.9         55           4
 L leucine            11.3         78           2
 M methionine          1.9         13           2
 N asparagine          3.2         22           2
 P proline             4.8         33           2
 Q glutamine          11.3         78           3
 R arginine            6.8         47           2
 S serine              6.1         42           3
 T threonine           4.2         29           3
 V valine              4.6         32           2
 W tryptophan          0.9          6           1
 Y tyrosine            1.2          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   golgi autoantigen, golgin subfamily a, 6 
GOLGA6B               0.984   golgi autoantigen, golgin subfamily a, 6B 
GOLGA6D               0.983   golgi autoantigen, golgin subfamily a, 6D 
GOLGA6C               0.981   PREDICTED: golgi autoantigen, golgin subfamily a, 6C...
LOC653073             0.329   PREDICTED: Golgin subfamily A member 8-like protein...
LOC390561             0.296   PREDICTED: similar to hect domain and RLD 2 
LOC653061             0.284   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC653061             0.282   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC653061             0.281   PREDICTED: similar to Golgin subfamily A member 8-l...
GOLGA8B               0.272   golgi autoantigen, golgin subfamily a, 8B 
GOLGA8A               0.272   golgi autoantigen, golgin subfamily a, 8A 
LOC653061             0.258   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC728047             0.256   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC728080             0.256   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC727909             0.256   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC728080             0.253   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC728047             0.253   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC727909             0.253   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC653720             0.253   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC653125             0.251   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC728498             0.249   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC653073             0.248   PREDICTED: Golgin subfamily A member 8-like protein...
LOC653125             0.247   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC653720             0.247   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC643699             0.246   PREDICTED: similar to golgi autoantigen, golgin sub...
GOLGA2                0.245   Golgi autoantigen, golgin subfamily a, 2 
LOC728498             0.242   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC643699             0.242   PREDICTED: similar to golgi autoantigen, golgin sub...
LOC653073             0.222   PREDICTED: Golgin subfamily A member 8-like protein...
GOLGA8E               0.212   golgi autoantigen, golgin subfamily a, 8E 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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