Guide to the Human Genome
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Name: MAP7D2 Sequence: fasta or formatted (732aa) NCBI GI: 22758136
Description:

MAP7 domain containing 2

Referenced in:

Tubulins and Microtubules

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.1         59           4
 C cysteine            1.1          8           1
 D aspartate           3.4         25           2
 E glutamate          13.9        102           4
 F phenylalanine       1.4         10           1
 G glycine             7.0         51           4
 H histidine           1.0          7           1
 I isoleucine          2.7         20           1
 K lysine             10.8         79           3
 L leucine             7.7         56           3
 M methionine          2.0         15           2
 N asparagine          2.7         20           1
 P proline             6.7         49           2
 Q glutamine           6.0         44           2
 R arginine            8.2         60           2
 S serine              7.0         51           3
 T threonine           4.6         34           2
 V valine              4.2         31           2
 W tryptophan          0.3          2           1
 Y tyrosine            1.2          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   MAP7 domain containing 2 
MAP7                  0.179   microtubule-associated protein 7 
MAP7D1                0.126   MAP7 domain containing 1 
MAP7D3                0.058   MAP7 domain containing 3 
GIGYF2                0.052   GRB10 interacting GYF protein 2 isoform c 
GIGYF2                0.052   GRB10 interacting GYF protein 2 isoform a 
GIGYF2                0.052   GRB10 interacting GYF protein 2 isoform b 
GIGYF2                0.052   GRB10 interacting GYF protein 2 isoform b 
INCENP                0.047   inner centromere protein antigens 135/155kDa isofor...
CALD1                 0.045   caldesmon 1 isoform 1 
INCENP                0.045   inner centromere protein antigens 135/155kDa isofor...
TCHH                  0.045   trichohyalin 
NEFH                  0.044   neurofilament, heavy polypeptide 200kDa 
LOC100133758          0.042   PREDICTED: hypothetical protein, partial 
EIF5B                 0.042   eukaryotic translation initiation factor 5B 
LOC100133599          0.041   PREDICTED: hypothetical protein 
LOC283685             0.040   PREDICTED: golgi autoantigen, golgin subfamily a-li...
WDR87                 0.040   NYD-SP11 protein 
TNIK                  0.040   TRAF2 and NCK interacting kinase isoform 6 
TNIK                  0.040   TRAF2 and NCK interacting kinase isoform 5 
TNIK                  0.040   TRAF2 and NCK interacting kinase isoform 2 
TNIK                  0.040   TRAF2 and NCK interacting kinase isoform 1 
LOC100133599          0.040   PREDICTED: hypothetical protein 
LOC283767             0.039   golgi autoantigen, golgin subfamily a-like 
MAP4K4                0.039   mitogen-activated protein kinase kinase kinase kinas...
LOC727832             0.039   golgi autoantigen, golgin subfamily a-like 
LOC651807             0.039   PREDICTED: hypothetical protein 
LOC645202             0.039   PREDICTED: hypothetical protein LOC645202 
LOC400352             0.038   PREDICTED: similar to Putative golgin subfamily A m...
LOC100132816          0.038   PREDICTED: similar to Putative golgin subfamily A m...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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