CCDC13 5485

Name: CCDC13	Sequence: fasta or formatted (715aa)		NCBI GI: 154090997
Description: coiled-coil domain containing 13		Referenced in: Coiled-Coil Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.3 52 2 C cysteine 0.0 0 0 D aspartate 4.1 29 2 E glutamate 11.6 83 2 F phenylalanine 1.7 12 1 G glycine 5.3 38 1 H histidine 2.1 15 2 I isoleucine 2.2 16 1 K lysine 8.3 59 3 L leucine 12.9 92 2 M methionine 2.4 17 1 N asparagine 2.9 21 2 P proline 3.1 22 2 Q glutamine 8.1 58 2 R arginine 8.1 58 1 S serine 8.5 61 2 T threonine 4.6 33 2 V valine 5.7 41 2 W tryptophan 0.4 3 1 Y tyrosine 0.7 5 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 coiled-coil domain containing 13 CCDC88A 0.046 coiled-coil domain containing 88A isoform 2 MYH9 0.045 myosin, heavy polypeptide 9, non-muscle CCDC88A 0.044 coiled-coil domain containing 88A isoform 1 C10orf118 0.040 CTCL tumor antigen L14-2 MYH14 0.040 myosin, heavy chain 14 isoform 1 MYH14 0.040 myosin, heavy chain 14 isoform 2 MYH14 0.040 myosin, heavy chain 14 isoform 3 CEP250 0.039 centrosomal protein 2 MYH10 0.039 myosin, heavy polypeptide 10, non-muscle NUMA1 0.039 nuclear mitotic apparatus protein 1 ERC1 0.038 RAB6-interacting protein 2 isoform epsilon CGN 0.037 cingulin CENPF 0.037 centromere protein F ERC1 0.037 RAB6-interacting protein 2 isoform delta MYH11 0.037 smooth muscle myosin heavy chain 11 isoform SM1A [Ho... MYH11 0.037 smooth muscle myosin heavy chain 11 isoform SM1B [Ho... MYH11 0.037 smooth muscle myosin heavy chain 11 isoform SM2B [Ho... MYH11 0.037 smooth muscle myosin heavy chain 11 isoform SM2A [Ho... CLIP1 0.036 restin isoform a TRIP11 0.036 thyroid hormone receptor interactor 11 CLIP1 0.035 restin isoform b CENPE 0.035 centromere protein E MYH7 0.034 myosin, heavy chain 7, cardiac muscle, beta CROCC 0.034 ciliary rootlet coiled-coil MYO18A 0.033 myosin 18A isoform b DSP 0.033 desmoplakin isoform I PPL 0.033 periplakin MYH2 0.033 myosin, heavy chain 2, skeletal muscle, adult [Homo... MYH2 0.033 myosin, heavy chain 2, skeletal muscle, adult [Homo... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.