Guide to the Human Genome
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Name: WTAP Sequence: fasta or formatted (396aa) NCBI GI: 21361159
Description:

Wilms' tumour 1-associating protein isoform 1

Referenced in:

Capping and Splicing

Other entries for this name:
alt prot [151aa] Wilms' tumour 1-associating protein isoform 2
alt prot [151aa] Wilms' tumour 1-associating protein isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.1         20           1
 C cysteine            0.8          3           1
 D aspartate           4.5         18           2
 E glutamate          10.1         40           2
 F phenylalanine       1.8          7           2
 G glycine             6.3         25           2
 H histidine           1.0          4           1
 I isoleucine          2.3          9           2
 K lysine              6.3         25           2
 L leucine             9.1         36           1
 M methionine          2.3          9           1
 N asparagine          5.1         20           1
 P proline             3.0         12           1
 Q glutamine          11.4         45           4
 R arginine            5.3         21           2
 S serine             11.9         47           3
 T threonine           6.6         26           2
 V valine              4.8         19           1
 W tryptophan          0.5          2           1
 Y tyrosine            2.0          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Wilms' tumour 1-associating protein isoform 1 
WTAP                  0.362   Wilms' tumour 1-associating protein isoform 2 
WTAP                  0.362   Wilms' tumour 1-associating protein isoform 2 
WDR87                 0.037   NYD-SP11 protein 
MYH10                 0.037   myosin, heavy polypeptide 10, non-muscle 
PLEC1                 0.036   plectin 1 isoform 11 
PLEC1                 0.036   plectin 1 isoform 10 
PLEC1                 0.036   plectin 1 isoform 8 
PLEC1                 0.036   plectin 1 isoform 7 
PLEC1                 0.036   plectin 1 isoform 6 
PLEC1                 0.036   plectin 1 isoform 3 
PLEC1                 0.036   plectin 1 isoform 2 
PLEC1                 0.036   plectin 1 isoform 1 
ROCK1                 0.035   Rho-associated, coiled-coil containing protein kinase...
MYH11                 0.035   smooth muscle myosin heavy chain 11 isoform SM1A [Ho...
MYH11                 0.035   smooth muscle myosin heavy chain 11 isoform SM1B [Ho...
MYH11                 0.035   smooth muscle myosin heavy chain 11 isoform SM2B [Ho...
MYH11                 0.035   smooth muscle myosin heavy chain 11 isoform SM2A [Ho...
CUX1                  0.033   cut-like homeobox 1 isoform a 
DSPP                  0.033   dentin sialophosphoprotein preproprotein 
NUMA1                 0.033   nuclear mitotic apparatus protein 1 
EPS15L1               0.032   epidermal growth factor receptor pathway substrate 1...
FKBP15                0.032   FK506 binding protein 15, 133kDa 
CCDC147               0.032   coiled-coil domain containing 147 
CENPF                 0.032   centromere protein F 
LOC100133758          0.032   PREDICTED: hypothetical protein, partial 
GOLGB1                0.032   golgi autoantigen, golgin subfamily b, macrogolgin ...
CEP110                0.032   centrosomal protein 110kDa 
ZNF853                0.031   zinc finger protein 853 
CIT                   0.031   citron 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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