Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: GRIPAP1 Sequence: fasta or formatted (841aa) NCBI GI: 46592991
Description:

GRIP1 associated protein 1 isoform 1

Not currently referenced in the text

Other entries for this name:
alt prot {625aa} GRIP1 associated protein 1 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.8         74           3
 C cysteine            0.7          6           1
 D aspartate           4.2         35           2
 E glutamate          15.2        128           3
 F phenylalanine       1.2         10           1
 G glycine             4.0         34           2
 H histidine           1.7         14           1
 I isoleucine          1.7         14           2
 K lysine              7.8         66           3
 L leucine            13.7        115           2
 M methionine          2.4         20           1
 N asparagine          2.6         22           2
 P proline             2.1         18           2
 Q glutamine          10.9         92           5
 R arginine            6.8         57           2
 S serine              7.5         63           3
 T threonine           3.4         29           2
 V valine              3.9         33           1
 W tryptophan          0.5          4           1
 Y tyrosine            0.8          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   GRIP1 associated protein 1 isoform 1 
GRIPAP1               0.670   GRIP1 associated protein 1 isoform 2 
NUMA1                 0.074   nuclear mitotic apparatus protein 1 
PLEC1                 0.069   plectin 1 isoform 11 
PLEC1                 0.069   plectin 1 isoform 10 
PLEC1                 0.069   plectin 1 isoform 8 
PLEC1                 0.069   plectin 1 isoform 7 
PLEC1                 0.069   plectin 1 isoform 6 
PLEC1                 0.069   plectin 1 isoform 3 
PLEC1                 0.069   plectin 1 isoform 2 
PLEC1                 0.069   plectin 1 isoform 1 
MYH3                  0.064   myosin, heavy chain 3, skeletal muscle, embryonic [H...
FYCO1                 0.063   FYVE and coiled-coil domain containing 1 
CEP250                0.063   centrosomal protein 2 
MYH9                  0.062   myosin, heavy polypeptide 9, non-muscle 
CGNL1                 0.062   cingulin-like 1 
C10orf118             0.060   CTCL tumor antigen L14-2 
GOLGB1                0.060   golgi autoantigen, golgin subfamily b, macrogolgin ...
EEA1                  0.060   early endosome antigen 1, 162kD 
TRIP11                0.059   thyroid hormone receptor interactor 11 
ERC1                  0.058   RAB6-interacting protein 2 isoform epsilon 
LOC283685             0.058   PREDICTED: golgi autoantigen, golgin subfamily a-li...
MYH1                  0.057   myosin, heavy chain 1, skeletal muscle, adult [Homo...
MYH13                 0.057   myosin, heavy polypeptide 13, skeletal muscle [Homo...
TCHH                  0.056   trichohyalin 
GOLGA4                0.056   golgi autoantigen, golgin subfamily a, 4 
GOLGA3                0.056   Golgi autoantigen, golgin subfamily a, 3 
CCDC88C               0.056   DVL-binding protein DAPLE 
ERC1                  0.056   RAB6-interacting protein 2 isoform delta 
MYH10                 0.056   myosin, heavy polypeptide 10, non-muscle 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press