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Search of human proteins with 4557755
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4557755 microphthalmia-associated transcription factor
isoform 4 [Homo sapiens]
(419 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4557755 microphthalmia-associated transcription factor isofor... 847 0.0
gi|38156697 microphthalmia-associated transcription factor isofo... 827 0.0
gi|38156705 microphthalmia-associated transcription factor isofo... 804 0.0
gi|38156703 microphthalmia-associated transcription factor isofo... 804 0.0
gi|38156701 microphthalmia-associated transcription factor isofo... 804 0.0
gi|38156699 microphthalmia-associated transcription factor isofo... 804 0.0
gi|8659574 transcription factor E3 [Homo sapiens] 365 e-101
gi|24307933 transcription factor EB [Homo sapiens] 303 2e-82
gi|6912702 transcription factor EC isoform a [Homo sapiens] 278 9e-75
gi|64762402 transcription factor EC isoform b [Homo sapiens] 258 7e-69
gi|46877105 upstream stimulatory factor 2 isoform 2 [Homo sapiens] 59 8e-09
gi|4507847 upstream stimulatory factor 2 isoform 1 [Homo sapiens] 59 8e-09
gi|6005934 upstream stimulatory factor 1 isoform 1 [Homo sapiens] 56 5e-08
gi|46877102 upstream stimulatory factor 1 isoform 2 [Homo sapiens] 56 5e-08
gi|52630419 sterol regulatory element binding transcription fact... 53 5e-07
gi|22547195 sterol regulatory element binding transcription fact... 53 5e-07
gi|27477113 sterol regulatory element-binding transcription fact... 52 1e-06
gi|114431248 hypothetical protein LOC205717 [Homo sapiens] 49 8e-06
gi|19923312 v-myc myelocytomatosis viral related oncogene, neuro... 44 4e-04
gi|4758010 clock [Homo sapiens] 43 5e-04
gi|31745180 aryl hydrocarbon receptor nuclear translocator-like ... 42 8e-04
gi|30795240 aryl hydrocarbon receptor nuclear translocator isofo... 42 8e-04
gi|4502231 aryl hydrocarbon receptor nuclear translocator isofor... 42 8e-04
gi|155030234 ribonuclease III, nuclear isoform 1 [Homo sapiens] 42 8e-04
gi|71852582 aryl hydrocarbon receptor nuclear translocator-like ... 42 0.001
gi|71852580 aryl hydrocarbon receptor nuclear translocator-like ... 42 0.001
gi|42716311 aryl hydrocarbon receptor nuclear translocator-like ... 42 0.001
gi|5453734 MAD4 [Homo sapiens] 42 0.001
gi|30795242 aryl hydrocarbon receptor nuclear translocator isofo... 40 0.003
gi|4507447 transcription factor AP-4 (activating enhancer bindin... 40 0.004
>gi|4557755 microphthalmia-associated transcription factor isoform 4
[Homo sapiens]
Length = 419
Score = 847 bits (2188), Expect = 0.0
Identities = 419/419 (100%), Positives = 419/419 (100%)
Query: 1 MLEMLEYNHYQVQTHLENPTKYHIQQAQRQQVKQYLSTTLANKHANQVLSLPCPNQPGDH 60
MLEMLEYNHYQVQTHLENPTKYHIQQAQRQQVKQYLSTTLANKHANQVLSLPCPNQPGDH
Sbjct: 1 MLEMLEYNHYQVQTHLENPTKYHIQQAQRQQVKQYLSTTLANKHANQVLSLPCPNQPGDH 60
Query: 61 VMPPVPGSSAPNSPMAMLTLNSNCEKEGFYKFEEQNRAESECPGMNTHSRASCMQMDDVI 120
VMPPVPGSSAPNSPMAMLTLNSNCEKEGFYKFEEQNRAESECPGMNTHSRASCMQMDDVI
Sbjct: 61 VMPPVPGSSAPNSPMAMLTLNSNCEKEGFYKFEEQNRAESECPGMNTHSRASCMQMDDVI 120
Query: 121 DDIISLESSYNEEILGLMDPALQMANTLPVSGNLIDLYGNQGLPPPGLTISNSCPANLPN 180
DDIISLESSYNEEILGLMDPALQMANTLPVSGNLIDLYGNQGLPPPGLTISNSCPANLPN
Sbjct: 121 DDIISLESSYNEEILGLMDPALQMANTLPVSGNLIDLYGNQGLPPPGLTISNSCPANLPN 180
Query: 181 IKRELTACIFPTESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMR 240
IKRELTACIFPTESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMR
Sbjct: 181 IKRELTACIFPTESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMR 240
Query: 241 WNKGTILKASVDYIRKLQREQQRAKELENRQKKLEHANRHLLLRIQELEMQARAHGLSLI 300
WNKGTILKASVDYIRKLQREQQRAKELENRQKKLEHANRHLLLRIQELEMQARAHGLSLI
Sbjct: 241 WNKGTILKASVDYIRKLQREQQRAKELENRQKKLEHANRHLLLRIQELEMQARAHGLSLI 300
Query: 301 PSTGLCSPDLVNRIIKQEPVLENCSQDLLQHHADLTCTTTLDLTDGTITFNNNLGTGTEA 360
PSTGLCSPDLVNRIIKQEPVLENCSQDLLQHHADLTCTTTLDLTDGTITFNNNLGTGTEA
Sbjct: 301 PSTGLCSPDLVNRIIKQEPVLENCSQDLLQHHADLTCTTTLDLTDGTITFNNNLGTGTEA 360
Query: 361 NQAYSVPTKMGSKLEDILMDDTLSPVGVTDPLLSSVSPGASKTSSRRSSMSMEETEHTC 419
NQAYSVPTKMGSKLEDILMDDTLSPVGVTDPLLSSVSPGASKTSSRRSSMSMEETEHTC
Sbjct: 361 NQAYSVPTKMGSKLEDILMDDTLSPVGVTDPLLSSVSPGASKTSSRRSSMSMEETEHTC 419
>gi|38156697 microphthalmia-associated transcription factor isoform
5 [Homo sapiens]
Length = 413
Score = 827 bits (2136), Expect = 0.0
Identities = 413/419 (98%), Positives = 413/419 (98%), Gaps = 6/419 (1%)
Query: 1 MLEMLEYNHYQVQTHLENPTKYHIQQAQRQQVKQYLSTTLANKHANQVLSLPCPNQPGDH 60
MLEMLEYNHYQVQTHLENPTKYHIQQAQRQQVKQYLSTTLANKHANQVLSLPCPNQPGDH
Sbjct: 1 MLEMLEYNHYQVQTHLENPTKYHIQQAQRQQVKQYLSTTLANKHANQVLSLPCPNQPGDH 60
Query: 61 VMPPVPGSSAPNSPMAMLTLNSNCEKEGFYKFEEQNRAESECPGMNTHSRASCMQMDDVI 120
VMPPVPGSSAPNSPMAMLTLNSNCEKEGFYKFEEQNRAESECPGMNTHSRASCMQMDDVI
Sbjct: 61 VMPPVPGSSAPNSPMAMLTLNSNCEKEGFYKFEEQNRAESECPGMNTHSRASCMQMDDVI 120
Query: 121 DDIISLESSYNEEILGLMDPALQMANTLPVSGNLIDLYGNQGLPPPGLTISNSCPANLPN 180
DDIISLESSYNEEILGLMDPALQMANTLPVSGNLIDLYGNQGLPPPGLTISNSCPANLPN
Sbjct: 121 DDIISLESSYNEEILGLMDPALQMANTLPVSGNLIDLYGNQGLPPPGLTISNSCPANLPN 180
Query: 181 IKRELTACIFPTESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMR 240
IKRELT ESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMR
Sbjct: 181 IKRELT------ESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMR 234
Query: 241 WNKGTILKASVDYIRKLQREQQRAKELENRQKKLEHANRHLLLRIQELEMQARAHGLSLI 300
WNKGTILKASVDYIRKLQREQQRAKELENRQKKLEHANRHLLLRIQELEMQARAHGLSLI
Sbjct: 235 WNKGTILKASVDYIRKLQREQQRAKELENRQKKLEHANRHLLLRIQELEMQARAHGLSLI 294
Query: 301 PSTGLCSPDLVNRIIKQEPVLENCSQDLLQHHADLTCTTTLDLTDGTITFNNNLGTGTEA 360
PSTGLCSPDLVNRIIKQEPVLENCSQDLLQHHADLTCTTTLDLTDGTITFNNNLGTGTEA
Sbjct: 295 PSTGLCSPDLVNRIIKQEPVLENCSQDLLQHHADLTCTTTLDLTDGTITFNNNLGTGTEA 354
Query: 361 NQAYSVPTKMGSKLEDILMDDTLSPVGVTDPLLSSVSPGASKTSSRRSSMSMEETEHTC 419
NQAYSVPTKMGSKLEDILMDDTLSPVGVTDPLLSSVSPGASKTSSRRSSMSMEETEHTC
Sbjct: 355 NQAYSVPTKMGSKLEDILMDDTLSPVGVTDPLLSSVSPGASKTSSRRSSMSMEETEHTC 413
>gi|38156705 microphthalmia-associated transcription factor isoform
6 [Homo sapiens]
Length = 495
Score = 804 bits (2076), Expect = 0.0
Identities = 402/409 (98%), Positives = 403/409 (98%), Gaps = 6/409 (1%)
Query: 11 QVQTHLENPTKYHIQQAQRQQVKQYLSTTLANKHANQVLSLPCPNQPGDHVMPPVPGSSA 70
+VQTHLENPTKYHIQQAQRQQVKQYLSTTLANKHANQVLSLPCPNQPGDHVMPPVPGSSA
Sbjct: 93 KVQTHLENPTKYHIQQAQRQQVKQYLSTTLANKHANQVLSLPCPNQPGDHVMPPVPGSSA 152
Query: 71 PNSPMAMLTLNSNCEKEGFYKFEEQNRAESECPGMNTHSRASCMQMDDVIDDIISLESSY 130
PNSPMAMLTLNSNCEKEGFYKFEEQNRAESECPGMNTHSRASCMQMDDVIDDIISLESSY
Sbjct: 153 PNSPMAMLTLNSNCEKEGFYKFEEQNRAESECPGMNTHSRASCMQMDDVIDDIISLESSY 212
Query: 131 NEEILGLMDPALQMANTLPVSGNLIDLYGNQGLPPPGLTISNSCPANLPNIKRELTACIF 190
NEEILGLMDPALQMANTLPVSGNLIDLYGNQGLPPPGLTISNSCPANLPNIKRELT
Sbjct: 213 NEEILGLMDPALQMANTLPVSGNLIDLYGNQGLPPPGLTISNSCPANLPNIKRELT---- 268
Query: 191 PTESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKGTILKAS 250
ESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKGTILKAS
Sbjct: 269 --ESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKGTILKAS 326
Query: 251 VDYIRKLQREQQRAKELENRQKKLEHANRHLLLRIQELEMQARAHGLSLIPSTGLCSPDL 310
VDYIRKLQREQQRAKELENRQKKLEHANRHLLLRIQELEMQARAHGLSLIPSTGLCSPDL
Sbjct: 327 VDYIRKLQREQQRAKELENRQKKLEHANRHLLLRIQELEMQARAHGLSLIPSTGLCSPDL 386
Query: 311 VNRIIKQEPVLENCSQDLLQHHADLTCTTTLDLTDGTITFNNNLGTGTEANQAYSVPTKM 370
VNRIIKQEPVLENCSQDLLQHHADLTCTTTLDLTDGTITFNNNLGTGTEANQAYSVPTKM
Sbjct: 387 VNRIIKQEPVLENCSQDLLQHHADLTCTTTLDLTDGTITFNNNLGTGTEANQAYSVPTKM 446
Query: 371 GSKLEDILMDDTLSPVGVTDPLLSSVSPGASKTSSRRSSMSMEETEHTC 419
GSKLEDILMDDTLSPVGVTDPLLSSVSPGASKTSSRRSSMSMEETEHTC
Sbjct: 447 GSKLEDILMDDTLSPVGVTDPLLSSVSPGASKTSSRRSSMSMEETEHTC 495
>gi|38156703 microphthalmia-associated transcription factor isoform
2 [Homo sapiens]
Length = 504
Score = 804 bits (2076), Expect = 0.0
Identities = 402/409 (98%), Positives = 403/409 (98%), Gaps = 6/409 (1%)
Query: 11 QVQTHLENPTKYHIQQAQRQQVKQYLSTTLANKHANQVLSLPCPNQPGDHVMPPVPGSSA 70
+VQTHLENPTKYHIQQAQRQQVKQYLSTTLANKHANQVLSLPCPNQPGDHVMPPVPGSSA
Sbjct: 102 KVQTHLENPTKYHIQQAQRQQVKQYLSTTLANKHANQVLSLPCPNQPGDHVMPPVPGSSA 161
Query: 71 PNSPMAMLTLNSNCEKEGFYKFEEQNRAESECPGMNTHSRASCMQMDDVIDDIISLESSY 130
PNSPMAMLTLNSNCEKEGFYKFEEQNRAESECPGMNTHSRASCMQMDDVIDDIISLESSY
Sbjct: 162 PNSPMAMLTLNSNCEKEGFYKFEEQNRAESECPGMNTHSRASCMQMDDVIDDIISLESSY 221
Query: 131 NEEILGLMDPALQMANTLPVSGNLIDLYGNQGLPPPGLTISNSCPANLPNIKRELTACIF 190
NEEILGLMDPALQMANTLPVSGNLIDLYGNQGLPPPGLTISNSCPANLPNIKRELT
Sbjct: 222 NEEILGLMDPALQMANTLPVSGNLIDLYGNQGLPPPGLTISNSCPANLPNIKRELT---- 277
Query: 191 PTESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKGTILKAS 250
ESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKGTILKAS
Sbjct: 278 --ESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKGTILKAS 335
Query: 251 VDYIRKLQREQQRAKELENRQKKLEHANRHLLLRIQELEMQARAHGLSLIPSTGLCSPDL 310
VDYIRKLQREQQRAKELENRQKKLEHANRHLLLRIQELEMQARAHGLSLIPSTGLCSPDL
Sbjct: 336 VDYIRKLQREQQRAKELENRQKKLEHANRHLLLRIQELEMQARAHGLSLIPSTGLCSPDL 395
Query: 311 VNRIIKQEPVLENCSQDLLQHHADLTCTTTLDLTDGTITFNNNLGTGTEANQAYSVPTKM 370
VNRIIKQEPVLENCSQDLLQHHADLTCTTTLDLTDGTITFNNNLGTGTEANQAYSVPTKM
Sbjct: 396 VNRIIKQEPVLENCSQDLLQHHADLTCTTTLDLTDGTITFNNNLGTGTEANQAYSVPTKM 455
Query: 371 GSKLEDILMDDTLSPVGVTDPLLSSVSPGASKTSSRRSSMSMEETEHTC 419
GSKLEDILMDDTLSPVGVTDPLLSSVSPGASKTSSRRSSMSMEETEHTC
Sbjct: 456 GSKLEDILMDDTLSPVGVTDPLLSSVSPGASKTSSRRSSMSMEETEHTC 504
>gi|38156701 microphthalmia-associated transcription factor isoform
3 [Homo sapiens]
Length = 519
Score = 804 bits (2076), Expect = 0.0
Identities = 402/409 (98%), Positives = 403/409 (98%), Gaps = 6/409 (1%)
Query: 11 QVQTHLENPTKYHIQQAQRQQVKQYLSTTLANKHANQVLSLPCPNQPGDHVMPPVPGSSA 70
+VQTHLENPTKYHIQQAQRQQVKQYLSTTLANKHANQVLSLPCPNQPGDHVMPPVPGSSA
Sbjct: 117 KVQTHLENPTKYHIQQAQRQQVKQYLSTTLANKHANQVLSLPCPNQPGDHVMPPVPGSSA 176
Query: 71 PNSPMAMLTLNSNCEKEGFYKFEEQNRAESECPGMNTHSRASCMQMDDVIDDIISLESSY 130
PNSPMAMLTLNSNCEKEGFYKFEEQNRAESECPGMNTHSRASCMQMDDVIDDIISLESSY
Sbjct: 177 PNSPMAMLTLNSNCEKEGFYKFEEQNRAESECPGMNTHSRASCMQMDDVIDDIISLESSY 236
Query: 131 NEEILGLMDPALQMANTLPVSGNLIDLYGNQGLPPPGLTISNSCPANLPNIKRELTACIF 190
NEEILGLMDPALQMANTLPVSGNLIDLYGNQGLPPPGLTISNSCPANLPNIKRELT
Sbjct: 237 NEEILGLMDPALQMANTLPVSGNLIDLYGNQGLPPPGLTISNSCPANLPNIKRELT---- 292
Query: 191 PTESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKGTILKAS 250
ESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKGTILKAS
Sbjct: 293 --ESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKGTILKAS 350
Query: 251 VDYIRKLQREQQRAKELENRQKKLEHANRHLLLRIQELEMQARAHGLSLIPSTGLCSPDL 310
VDYIRKLQREQQRAKELENRQKKLEHANRHLLLRIQELEMQARAHGLSLIPSTGLCSPDL
Sbjct: 351 VDYIRKLQREQQRAKELENRQKKLEHANRHLLLRIQELEMQARAHGLSLIPSTGLCSPDL 410
Query: 311 VNRIIKQEPVLENCSQDLLQHHADLTCTTTLDLTDGTITFNNNLGTGTEANQAYSVPTKM 370
VNRIIKQEPVLENCSQDLLQHHADLTCTTTLDLTDGTITFNNNLGTGTEANQAYSVPTKM
Sbjct: 411 VNRIIKQEPVLENCSQDLLQHHADLTCTTTLDLTDGTITFNNNLGTGTEANQAYSVPTKM 470
Query: 371 GSKLEDILMDDTLSPVGVTDPLLSSVSPGASKTSSRRSSMSMEETEHTC 419
GSKLEDILMDDTLSPVGVTDPLLSSVSPGASKTSSRRSSMSMEETEHTC
Sbjct: 471 GSKLEDILMDDTLSPVGVTDPLLSSVSPGASKTSSRRSSMSMEETEHTC 519
>gi|38156699 microphthalmia-associated transcription factor isoform
1 [Homo sapiens]
Length = 520
Score = 804 bits (2076), Expect = 0.0
Identities = 402/409 (98%), Positives = 403/409 (98%), Gaps = 6/409 (1%)
Query: 11 QVQTHLENPTKYHIQQAQRQQVKQYLSTTLANKHANQVLSLPCPNQPGDHVMPPVPGSSA 70
+VQTHLENPTKYHIQQAQRQQVKQYLSTTLANKHANQVLSLPCPNQPGDHVMPPVPGSSA
Sbjct: 118 KVQTHLENPTKYHIQQAQRQQVKQYLSTTLANKHANQVLSLPCPNQPGDHVMPPVPGSSA 177
Query: 71 PNSPMAMLTLNSNCEKEGFYKFEEQNRAESECPGMNTHSRASCMQMDDVIDDIISLESSY 130
PNSPMAMLTLNSNCEKEGFYKFEEQNRAESECPGMNTHSRASCMQMDDVIDDIISLESSY
Sbjct: 178 PNSPMAMLTLNSNCEKEGFYKFEEQNRAESECPGMNTHSRASCMQMDDVIDDIISLESSY 237
Query: 131 NEEILGLMDPALQMANTLPVSGNLIDLYGNQGLPPPGLTISNSCPANLPNIKRELTACIF 190
NEEILGLMDPALQMANTLPVSGNLIDLYGNQGLPPPGLTISNSCPANLPNIKRELT
Sbjct: 238 NEEILGLMDPALQMANTLPVSGNLIDLYGNQGLPPPGLTISNSCPANLPNIKRELT---- 293
Query: 191 PTESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKGTILKAS 250
ESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKGTILKAS
Sbjct: 294 --ESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKGTILKAS 351
Query: 251 VDYIRKLQREQQRAKELENRQKKLEHANRHLLLRIQELEMQARAHGLSLIPSTGLCSPDL 310
VDYIRKLQREQQRAKELENRQKKLEHANRHLLLRIQELEMQARAHGLSLIPSTGLCSPDL
Sbjct: 352 VDYIRKLQREQQRAKELENRQKKLEHANRHLLLRIQELEMQARAHGLSLIPSTGLCSPDL 411
Query: 311 VNRIIKQEPVLENCSQDLLQHHADLTCTTTLDLTDGTITFNNNLGTGTEANQAYSVPTKM 370
VNRIIKQEPVLENCSQDLLQHHADLTCTTTLDLTDGTITFNNNLGTGTEANQAYSVPTKM
Sbjct: 412 VNRIIKQEPVLENCSQDLLQHHADLTCTTTLDLTDGTITFNNNLGTGTEANQAYSVPTKM 471
Query: 371 GSKLEDILMDDTLSPVGVTDPLLSSVSPGASKTSSRRSSMSMEETEHTC 419
GSKLEDILMDDTLSPVGVTDPLLSSVSPGASKTSSRRSSMSMEETEHTC
Sbjct: 472 GSKLEDILMDDTLSPVGVTDPLLSSVSPGASKTSSRRSSMSMEETEHTC 520
>gi|8659574 transcription factor E3 [Homo sapiens]
Length = 575
Score = 365 bits (936), Expect = e-101
Identities = 227/451 (50%), Positives = 275/451 (60%), Gaps = 102/451 (22%)
Query: 11 QVQTHLENPTKYHIQQAQRQQVKQYLSTTLANKHANQVLSLPCPNQPGDHVMPPVPG--- 67
+VQTHLENPT+YH+QQA+RQQVKQYLSTTL K A+Q L+ P PG P+P
Sbjct: 178 KVQTHLENPTRYHLQQARRQQVKQYLSTTLGPKLASQALTPP----PGPASAQPLPAPEA 233
Query: 68 -------SSAPNSPMAMLTLNSNCEKEGFYKFEEQNRAESECPGMNTHSRASCMQMDDVI 120
SAPNSPMA+LT+ S+ EKE +DDVI
Sbjct: 234 AHTTGPTGSAPNSPMALLTIGSSSEKE----------------------------IDDVI 265
Query: 121 DDIISLESSYNEEILGLMD---PALQMANTLPVSGNLIDLYGNQGLPPPGLTISNSCPAN 177
D+IISLESSYN+E+L + LQ+ +TLPVSGNL+D+Y +QG+ P +T+SNSCPA
Sbjct: 266 DEIISLESSYNDEMLSYLPGGTTGLQLPSTLPVSGNLLDVYSSQGVATPAITVSNSCPAE 325
Query: 178 LPNIKRELTACIFPTESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDP 237
LPNIKRE++ E+EA+AL KERQKKDNHNLIERRRRFNINDRIKELGTLIPKS+DP
Sbjct: 326 LPNIKREIS------ETEAKALLKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSSDP 379
Query: 238 DMRWNKGTILKASVDYIRKLQREQQRAKELENRQKKLEHANRHLLLRIQELEMQARAHGL 297
+MRWNKGTILKASVDYIRKLQ+EQQR+K+LE+RQ+ LE ANR L LRIQELE+QA+ HGL
Sbjct: 380 EMRWNKGTILKASVDYIRKLQKEQQRSKDLESRQRSLEQANRSLQLRIQELELQAQIHGL 439
Query: 298 SLIPSTGLCSPDLVNRIIKQEPVLENCSQDLLQHHADLTCTTTLDLTDGTITFNNNLGTG 357
+ P+ GL S + S L D+ + G TF ++G G
Sbjct: 440 PVPPTPGLLS-----------LATTSASDSLKPEQLDI----EEEGRPGAATF--HVGGG 482
Query: 358 TEANQAYSVPTKMGSK----------------------LEDILMDD-----------TLS 384
N + P S LEDILM++ LS
Sbjct: 483 PAQNAPHQQPPAPPSDALLDLHFPSDHLGDLGDPFHLGLEDILMEEEEGVVGGLSGGALS 542
Query: 385 PV-GVTDPLLSSVSPGASKTSSRRSSMSMEE 414
P+ +DPLLSSVSP SK SSRRSS SMEE
Sbjct: 543 PLRAASDPLLSSVSPAVSKASSRRSSFSMEE 573
>gi|24307933 transcription factor EB [Homo sapiens]
Length = 476
Score = 303 bits (775), Expect = 2e-82
Identities = 196/443 (44%), Positives = 260/443 (58%), Gaps = 80/443 (18%)
Query: 11 QVQTHLENPTKYHIQQAQRQQVKQYLSTTLANKHANQVLSL------PCPNQPG---DHV 61
+VQ++LENPT YH+QQ+Q Q+V++YLS T NK A + P PG HV
Sbjct: 71 KVQSYLENPTSYHLQQSQHQKVREYLSETYGNKFAAHISPAQGSPKPPPAASPGVRAGHV 130
Query: 62 MPPVPGSSAPNSPMAMLTLNSNCEKEGFYKFEEQNRAESECPGMNTHSRASCMQMDDVID 121
+ G+SAPNSPMAML + SN E+E +DDVID
Sbjct: 131 LSSSAGNSAPNSPMAMLHIGSNPERE----------------------------LDDVID 162
Query: 122 DIISLESSYNEEILGLMDPALQMANTLPVSGNLIDLYGNQGLPPPGLT--ISNSCPANLP 179
+I+ L+ ++LG ++P +QM NTLP+S + +++Y + L S+SCPA+L
Sbjct: 163 NIMRLD-----DVLGYINPEMQMPNTLPLSSSHLNVYSSDPQVTASLVGVTSSSCPADLT 217
Query: 180 NIKRELTACIFPTESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDM 239
KRELT ++E+RALAKERQKKDNHNLIERRRRFNINDRIKELG LIPK+ND D+
Sbjct: 218 Q-KRELT------DAESRALAKERQKKDNHNLIERRRRFNINDRIKELGMLIPKANDLDV 270
Query: 240 RWNKGTILKASVDYIRKLQREQQRAKELENRQKKLEHANRHLLLRIQELEMQARAHGLSL 299
RWNKGTILKASVDYIR++Q++ Q+++ELEN ++LE N+ L LRIQELEMQAR HGL
Sbjct: 271 RWNKGTILKASVDYIRRMQKDLQKSRELENHSRRLEMTNKQLWLRIQELEMQARVHGLPT 330
Query: 300 IPSTGLCSPDLVNRIIKQE-PVLENCSQDL--------------LQHHADLTCTTTLDLT 344
+G+ +L +++KQE P E + L L A L T
Sbjct: 331 TSPSGMNMAELAQQVVKQELPSEEGPGEALMLGAEVPDPEPLPALPPQAPLPLPTQPPSP 390
Query: 345 DGTITFNNNLGTG---TEANQAYSVPTKMG----------SKLEDILMDDTLSPVGVTDP 391
+ F+++L G E Y P G L+ +L+DD+L P+ +DP
Sbjct: 391 FHHLDFSHSLSFGGREDEGPPGYPEPLAPGHGSPFPSLSKKDLDLMLLDDSLLPL-ASDP 449
Query: 392 LLSSVSPGASKTSSRRSSMSMEE 414
LLS++SP ASK SSRRSS SMEE
Sbjct: 450 LLSTMSPEASKASSRRSSFSMEE 472
>gi|6912702 transcription factor EC isoform a [Homo sapiens]
Length = 347
Score = 278 bits (710), Expect = 9e-75
Identities = 171/302 (56%), Positives = 214/302 (70%), Gaps = 22/302 (7%)
Query: 116 MDDVIDDIISLESSYNEEILGLMDPALQMANTLPVSGNLIDLY-GNQGLPP--PGLTISN 172
M+DVI+DII +ESS+ EE D L M TL SG+++D+Y G QG+ P GLT S
Sbjct: 61 MEDVIEDIIGMESSFKEEGA---DSPLLMQRTL--SGSILDVYSGEQGISPINMGLT-SA 114
Query: 173 SCPANLPNIKRELTACIFPTESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIP 232
SCP++LP +KRE+T E++ RALAKERQKKDNHNLIERRRR+NIN RIKELGTLIP
Sbjct: 115 SCPSSLP-MKREIT------ETDTRALAKERQKKDNHNLIERRRRYNINYRIKELGTLIP 167
Query: 233 KSNDPDMRWNKGTILKASVDYIRKLQREQQRAKELENRQKKLEHANRHLLLRIQELEMQA 292
KSNDPDMRWNKGTILKASV+YI+ LQ+EQQRA+ELE+RQKKLE ANR LLLRIQELE+QA
Sbjct: 168 KSNDPDMRWNKGTILKASVEYIKWLQKEQQRARELEHRQKKLEQANRRLLLRIQELEIQA 227
Query: 293 RAHGLSLIPSTGLCSPDLVNRIIKQEPVLENCSQDLLQHHADLTCTTTLDLTDGTITFNN 352
R HGL + S G + DL + KQ+ E S D Q ++ + +L D I F++
Sbjct: 228 RTHGLPTLASLG--TVDLGAHVTKQQSHPEQNSVDYCQQ-LTVSQGPSPELCDQAIAFSD 284
Query: 353 NLGTGTEANQAYSVPTKMGSKLEDILMDDTLSPVGVTDPLLSSVSPGASKTSSRRSSMSM 412
L T+ + +S K +L+ +L+DDT+SP G TDPLLS+ SP SK SSRRSS S
Sbjct: 285 PLSYFTDLS--FSAALKEEQRLDGMLLDDTISPFG-TDPLLSATSPAVSKESSRRSSFSS 341
Query: 413 EE 414
++
Sbjct: 342 DD 343
>gi|64762402 transcription factor EC isoform b [Homo sapiens]
Length = 318
Score = 258 bits (659), Expect = 7e-69
Identities = 154/268 (57%), Positives = 194/268 (72%), Gaps = 17/268 (6%)
Query: 150 VSGNLIDLY-GNQGLPP--PGLTISNSCPANLPNIKRELTACIFPTESEARALAKERQKK 206
+SG+++D+Y G QG+ P GLT S SCP++LP +KRE+T E++ RALAKERQKK
Sbjct: 61 LSGSILDVYSGEQGISPINMGLT-SASCPSSLP-MKREIT------ETDTRALAKERQKK 112
Query: 207 DNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKGTILKASVDYIRKLQREQQRAKE 266
DNHNLIERRRR+NIN RIKELGTLIPKSNDPDMRWNKGTILKASV+YI+ LQ+EQQRA+E
Sbjct: 113 DNHNLIERRRRYNINYRIKELGTLIPKSNDPDMRWNKGTILKASVEYIKWLQKEQQRARE 172
Query: 267 LENRQKKLEHANRHLLLRIQELEMQARAHGLSLIPSTGLCSPDLVNRIIKQEPVLENCSQ 326
LE+RQKKLE ANR LLLRIQELE+QAR HGL + S G + DL + KQ+ E S
Sbjct: 173 LEHRQKKLEQANRRLLLRIQELEIQARTHGLPTLASLG--TVDLGAHVTKQQSHPEQNSV 230
Query: 327 DLLQHHADLTCTTTLDLTDGTITFNNNLGTGTEANQAYSVPTKMGSKLEDILMDDTLSPV 386
D Q ++ + +L D I F++ L T+ + +S K +L+ +L+DDT+SP
Sbjct: 231 DYCQQ-LTVSQGPSPELCDQAIAFSDPLSYFTDLS--FSAALKEEQRLDGMLLDDTISPF 287
Query: 387 GVTDPLLSSVSPGASKTSSRRSSMSMEE 414
G TDPLLS+ SP SK SSRRSS S ++
Sbjct: 288 G-TDPLLSATSPAVSKESSRRSSFSSDD 314
>gi|46877105 upstream stimulatory factor 2 isoform 2 [Homo sapiens]
Length = 279
Score = 58.9 bits (141), Expect = 8e-09
Identities = 35/109 (32%), Positives = 61/109 (55%), Gaps = 9/109 (8%)
Query: 201 KERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRW--NKGTILKASVDYIRKLQ 258
++ +++ HN +ERRRR IN+ I +L +IP N + + +KG IL + DYIR+L+
Sbjct: 165 RDERRRAQHNEVERRRRDKINNWIVQLSKIIPDCNADNSKTGASKGGILSKACDYIRELR 224
Query: 259 REQQRAKELENRQKKLEHANRHLLLRIQELE-------MQARAHGLSLI 300
+ QR +E ++L+ N L +I+EL+ Q + H L ++
Sbjct: 225 QTNQRMQETFKEAERLQMDNELLRQQIEELKNENALLRAQLQQHNLEMV 273
>gi|4507847 upstream stimulatory factor 2 isoform 1 [Homo sapiens]
Length = 346
Score = 58.9 bits (141), Expect = 8e-09
Identities = 35/109 (32%), Positives = 61/109 (55%), Gaps = 9/109 (8%)
Query: 201 KERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRW--NKGTILKASVDYIRKLQ 258
++ +++ HN +ERRRR IN+ I +L +IP N + + +KG IL + DYIR+L+
Sbjct: 232 RDERRRAQHNEVERRRRDKINNWIVQLSKIIPDCNADNSKTGASKGGILSKACDYIRELR 291
Query: 259 REQQRAKELENRQKKLEHANRHLLLRIQELE-------MQARAHGLSLI 300
+ QR +E ++L+ N L +I+EL+ Q + H L ++
Sbjct: 292 QTNQRMQETFKEAERLQMDNELLRQQIEELKNENALLRAQLQQHNLEMV 340
>gi|6005934 upstream stimulatory factor 1 isoform 1 [Homo sapiens]
Length = 310
Score = 56.2 bits (134), Expect = 5e-08
Identities = 40/125 (32%), Positives = 66/125 (52%), Gaps = 19/125 (15%)
Query: 190 FPTESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMR--WNKGTIL 247
+ +SEA ++ +++ HN +ERRRR IN+ I +L +IP + + +KG IL
Sbjct: 185 YSPKSEAPRTTRDEKRRAQHNEVERRRRDKINNWIVQLSKIIPDCSMESTKSGQSKGGIL 244
Query: 248 KASVDYIRKLQREQQRAKE---------LEN---RQKKLEHANRHLLLRIQELEMQARAH 295
+ DYI++L++ R E L+N RQ+ + N++LLLR Q R H
Sbjct: 245 SKACDYIQELRQSNHRLSEELQGLDQLQLDNDVLRQQVEDLKNKNLLLR-----AQLRHH 299
Query: 296 GLSLI 300
GL ++
Sbjct: 300 GLEVV 304
>gi|46877102 upstream stimulatory factor 1 isoform 2 [Homo sapiens]
Length = 251
Score = 56.2 bits (134), Expect = 5e-08
Identities = 40/125 (32%), Positives = 66/125 (52%), Gaps = 19/125 (15%)
Query: 190 FPTESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMR--WNKGTIL 247
+ +SEA ++ +++ HN +ERRRR IN+ I +L +IP + + +KG IL
Sbjct: 126 YSPKSEAPRTTRDEKRRAQHNEVERRRRDKINNWIVQLSKIIPDCSMESTKSGQSKGGIL 185
Query: 248 KASVDYIRKLQREQQRAKE---------LEN---RQKKLEHANRHLLLRIQELEMQARAH 295
+ DYI++L++ R E L+N RQ+ + N++LLLR Q R H
Sbjct: 186 SKACDYIQELRQSNHRLSEELQGLDQLQLDNDVLRQQVEDLKNKNLLLR-----AQLRHH 240
Query: 296 GLSLI 300
GL ++
Sbjct: 241 GLEVV 245
>gi|52630419 sterol regulatory element binding transcription factor
1 isoform a [Homo sapiens]
Length = 1177
Score = 53.1 bits (126), Expect = 5e-07
Identities = 32/89 (35%), Positives = 52/89 (58%), Gaps = 4/89 (4%)
Query: 194 SEARALAKER-QKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKGTILKASVD 252
S+A A A+ R +K+ HN IE+R R +IND+I EL L+ + + + NK +L+ ++D
Sbjct: 342 SKAPASAQSRGEKRTAHNAIEKRYRSSINDKIIELKDLVVGT---EAKLNKSAVLRKAID 398
Query: 253 YIRKLQREQQRAKELENRQKKLEHANRHL 281
YIR LQ Q+ K+ + H ++ L
Sbjct: 399 YIRFLQHSNQKLKQENLSLRTAVHKSKSL 427
>gi|22547195 sterol regulatory element binding transcription factor
1 isoform b [Homo sapiens]
Length = 1147
Score = 53.1 bits (126), Expect = 5e-07
Identities = 32/89 (35%), Positives = 52/89 (58%), Gaps = 4/89 (4%)
Query: 194 SEARALAKER-QKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKGTILKASVD 252
S+A A A+ R +K+ HN IE+R R +IND+I EL L+ + + + NK +L+ ++D
Sbjct: 312 SKAPASAQSRGEKRTAHNAIEKRYRSSINDKIIELKDLVVGT---EAKLNKSAVLRKAID 368
Query: 253 YIRKLQREQQRAKELENRQKKLEHANRHL 281
YIR LQ Q+ K+ + H ++ L
Sbjct: 369 YIRFLQHSNQKLKQENLSLRTAVHKSKSL 397
>gi|27477113 sterol regulatory element-binding transcription factor
2 [Homo sapiens]
Length = 1141
Score = 52.0 bits (123), Expect = 1e-06
Identities = 29/82 (35%), Positives = 50/82 (60%), Gaps = 4/82 (4%)
Query: 201 KERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKGTILKASVDYIRKLQRE 260
KE +++ HN+IE+R R +IND+I EL L+ + D + +K +L+ ++DYI+ LQ+
Sbjct: 327 KEGERRTTHNIIEKRYRSSINDKIIELKDLVMGT---DAKMHKSGVLRKAIDYIKYLQQV 383
Query: 261 QQRAKELENRQKKLEHANRHLL 282
+ ++ EN KL + LL
Sbjct: 384 NHKLRQ-ENMVLKLANQKNKLL 404
>gi|114431248 hypothetical protein LOC205717 [Homo sapiens]
Length = 2245
Score = 48.9 bits (115), Expect = 8e-06
Identities = 31/99 (31%), Positives = 54/99 (54%), Gaps = 13/99 (13%)
Query: 192 TESEARALAKERQK-KDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKGTILKAS 250
TE+E + R+K ++ HN +ER R+ IN I +G LIP S P ++ +K IL +
Sbjct: 5 TENETPTKKQHRKKNRETHNAVERHRKKKINAGINRIGELIPCS--PALKQSKNMILDQA 62
Query: 251 VDYIRKLQRE----------QQRAKELENRQKKLEHANR 279
YI +L+R+ ++A+E++ +K+LE +
Sbjct: 63 FKYITELKRQNDELLLNGGNNEQAEEIKKLRKQLEEIQK 101
>gi|19923312 v-myc myelocytomatosis viral related oncogene,
neuroblastoma derived [Homo sapiens]
Length = 464
Score = 43.5 bits (101), Expect = 4e-04
Identities = 32/126 (25%), Positives = 63/126 (50%), Gaps = 13/126 (10%)
Query: 160 NQGLPPPGLTISNSCPANLPNIKRELTACIFPTESEARALAKERQKKDNHNLIERRRRFN 219
++ PP S + P L ++ + P S++ ++ +++ NHN++ER+RR +
Sbjct: 341 SEDAPPQKKIKSEASPRPLKSVIPPKAKSLSPRNSDS----EDSERRRNHNILERQRRND 396
Query: 220 INDRIKELGTLIPKSNDPDMRWNKGTILKASVDYIRKLQREQQR----AKELENRQ---- 271
+ L +P+ + + K ILK + +Y+ LQ E+ + ++L+ RQ
Sbjct: 397 LRSSFLTLRDHVPELVKNE-KAAKVVILKKATEYVHSLQAEEHQLLLEKEKLQARQQQLL 455
Query: 272 KKLEHA 277
KK+EHA
Sbjct: 456 KKIEHA 461
>gi|4758010 clock [Homo sapiens]
Length = 846
Score = 43.1 bits (100), Expect = 5e-04
Identities = 23/71 (32%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 201 KERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKGTILKASVDYIRKLQRE 260
K++ K+ + N E++RR N IKELG+++P + + +K T+L+ S+D++RK +
Sbjct: 31 KDKAKRVSRNKSEKKRRDQFNVLIKELGSMLPGN---ARKMDKSTVLQKSIDFLRKHKEI 87
Query: 261 QQRAKELENRQ 271
++ E RQ
Sbjct: 88 TAQSDASEIRQ 98
>gi|31745180 aryl hydrocarbon receptor nuclear translocator-like 2
[Homo sapiens]
Length = 636
Score = 42.4 bits (98), Expect = 8e-04
Identities = 26/88 (29%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Query: 201 KERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKGTILKASVDYIRKLQRE 260
K + ++ H+ E+RRR +N+ I+EL +IP+ N + +K T+L+ +V ++R L+
Sbjct: 104 KMKAFREAHSQTEKRRRDKMNNLIEELSAMIPQCNPMARKLDKLTVLRMAVQHLRSLKGL 163
Query: 261 QQRAKELENRQKKL-EHANRHLLLRIQE 287
R L ++ RHL+L+ E
Sbjct: 164 TNSYVGSNYRPSFLQDNELRHLILKTAE 191
>gi|30795240 aryl hydrocarbon receptor nuclear translocator isoform
2 [Homo sapiens]
Length = 328
Score = 42.4 bits (98), Expect = 8e-04
Identities = 22/67 (32%), Positives = 40/67 (59%)
Query: 192 TESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKGTILKASV 251
++ E + KER ++NH+ IERRRR + I EL ++P + + +K TIL+ +V
Sbjct: 77 SDDEQSSADKERLARENHSEIERRRRNKMTAYITELSDMVPTCSALARKPDKLTILRMAV 136
Query: 252 DYIRKLQ 258
+++ L+
Sbjct: 137 SHMKSLR 143
>gi|4502231 aryl hydrocarbon receptor nuclear translocator isoform 1
[Homo sapiens]
Length = 789
Score = 42.4 bits (98), Expect = 8e-04
Identities = 22/67 (32%), Positives = 40/67 (59%)
Query: 192 TESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKGTILKASV 251
++ E + KER ++NH+ IERRRR + I EL ++P + + +K TIL+ +V
Sbjct: 77 SDDEQSSADKERLARENHSEIERRRRNKMTAYITELSDMVPTCSALARKPDKLTILRMAV 136
Query: 252 DYIRKLQ 258
+++ L+
Sbjct: 137 SHMKSLR 143
>gi|155030234 ribonuclease III, nuclear isoform 1 [Homo sapiens]
Length = 1374
Score = 42.4 bits (98), Expect = 8e-04
Identities = 44/179 (24%), Positives = 75/179 (41%), Gaps = 31/179 (17%)
Query: 158 YGNQGLPPPGLTISNSCPAN-LPNIK-------RELTACIFP-TESEARALAK------E 202
Y + PPP + P++ LP+ R L P SE R+ +
Sbjct: 172 YSHHNFPPPSFNSFQNNPSSFLPSANNSSSPHFRHLPPYPLPKAPSERRSPERLKHYDDH 231
Query: 203 RQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRW----NKGTILKASVDYIRKLQ 258
R + +H ER R + +R + P D R+ ++G Y R +
Sbjct: 232 RHRDHSHGRGERHRSLDRRERGRS-----PDRRRQDSRYRSDYDRGRTPSRHRSYERSRE 286
Query: 259 REQQRAKELENRQK-KLEHANRHLLLRIQELEMQARAHGLSLIPSTGLCSPDLVNRIIK 316
RE++R + +NR+ LE + + +E + R++GLS++P C+P+L IIK
Sbjct: 287 RERERHRHRDNRRSPSLERSYK------KEYKRSGRSYGLSVVPEPAGCTPELPGEIIK 339
>gi|71852582 aryl hydrocarbon receptor nuclear translocator-like
isoform b [Homo sapiens]
Length = 582
Score = 41.6 bits (96), Expect = 0.001
Identities = 24/83 (28%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Query: 203 RQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKGTILKASVDYIRKLQREQQ 262
+ ++ H+ IE+RRR +N I EL +L+P N + +K T+L+ +V +++ L+
Sbjct: 28 KNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATN 87
Query: 263 RAKELENRQKKL-EHANRHLLLR 284
E + L + +HL+LR
Sbjct: 88 PYTEANYKPTFLSDDELKHLILR 110
>gi|71852580 aryl hydrocarbon receptor nuclear translocator-like
isoform a [Homo sapiens]
Length = 625
Score = 41.6 bits (96), Expect = 0.001
Identities = 24/83 (28%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Query: 203 RQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKGTILKASVDYIRKLQREQQ 262
+ ++ H+ IE+RRR +N I EL +L+P N + +K T+L+ +V +++ L+
Sbjct: 71 KNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATN 130
Query: 263 RAKELENRQKKL-EHANRHLLLR 284
E + L + +HL+LR
Sbjct: 131 PYTEANYKPTFLSDDELKHLILR 153
>gi|42716311 aryl hydrocarbon receptor nuclear translocator-like
isoform a [Homo sapiens]
Length = 625
Score = 41.6 bits (96), Expect = 0.001
Identities = 24/83 (28%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Query: 203 RQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKGTILKASVDYIRKLQREQQ 262
+ ++ H+ IE+RRR +N I EL +L+P N + +K T+L+ +V +++ L+
Sbjct: 71 KNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATN 130
Query: 263 RAKELENRQKKL-EHANRHLLLR 284
E + L + +HL+LR
Sbjct: 131 PYTEANYKPTFLSDDELKHLILR 153
>gi|5453734 MAD4 [Homo sapiens]
Length = 209
Score = 41.6 bits (96), Expect = 0.001
Identities = 25/97 (25%), Positives = 54/97 (55%), Gaps = 4/97 (4%)
Query: 196 ARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKGTILKASVDYIR 255
A + K + +HN +E+ RR + +++L L+P D R ++LK + +I+
Sbjct: 45 AGLVRKAPNNRSSHNELEKHRRAKLRLYLEQLKQLVPLGPD-STRHTTLSLLKRAKVHIK 103
Query: 256 KLQREQQRAKELENRQKKLEHANRHLLLRIQELEMQA 292
KL+ + +RA + +++L+ +R L R+++L +Q+
Sbjct: 104 KLEEQDRRALSI---KEQLQQEHRFLKRRLEQLSVQS 137
>gi|30795242 aryl hydrocarbon receptor nuclear translocator isoform
3 [Homo sapiens]
Length = 774
Score = 40.4 bits (93), Expect = 0.003
Identities = 21/58 (36%), Positives = 36/58 (62%)
Query: 201 KERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKGTILKASVDYIRKLQ 258
KER ++NH+ IERRRR + I EL ++P + + +K TIL+ +V +++ L+
Sbjct: 71 KERFARENHSEIERRRRNKMTAYITELSDMVPTCSALARKPDKLTILRMAVSHMKSLR 128
>gi|4507447 transcription factor AP-4 (activating enhancer binding
protein 4) [Homo sapiens]
Length = 338
Score = 40.0 bits (92), Expect = 0.004
Identities = 32/120 (26%), Positives = 56/120 (46%), Gaps = 12/120 (10%)
Query: 191 PTESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKGTILKAS 250
P E + + R +++ N ERRR +IN + L TLIP ++ + +K IL+ +
Sbjct: 35 PLTPETQRDQERRIRREIANSNERRRMQSINAGFQSLKTLIPHTDGEKL--SKAAILQQT 92
Query: 251 VDYIRKLQREQQRAKELENRQKKLEHANRHLLLRIQELEMQARAHGLSLIPSTGLCSPDL 310
+YI L++E+ R + + K+ IQEL + + G+ SPD+
Sbjct: 93 AEYIFSLEQEKTRLLQQNTQLKRF----------IQELSGSSPKRRRAEDKDEGIGSPDI 142
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.313 0.129 0.372
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,958,664
Number of Sequences: 37866
Number of extensions: 800457
Number of successful extensions: 3526
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 117
Number of HSP's that attempted gapping in prelim test: 3384
Number of HSP's gapped (non-prelim): 235
length of query: 419
length of database: 18,247,518
effective HSP length: 105
effective length of query: 314
effective length of database: 14,271,588
effective search space: 4481278632
effective search space used: 4481278632
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.