MITF 26784

Name: MITF	Sequence: fasta or formatted (413aa)		NCBI GI: 38156697
Description: microphthalmia-associated transcription factor isoform 5		Referenced in: Skin and Related Tissues Helix-Loop-Helix Transcription Factors
Other entries for this name: alt prot [520aa] microphthalmia-associated transcription factor isoform 1 alt prot [519aa] microphthalmia-associated transcription factor isoform 3 alt prot [504aa] microphthalmia-associated transcription factor isoform 2 alt prot [495aa] microphthalmia-associated transcription factor isoform 6 alt prot [419aa] microphthalmia-associated transcription factor isoform 4
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.3 22 1 C cysteine 2.2 9 1 D aspartate 5.1 21 2 E glutamate 7.5 31 2 F phenylalanine 1.0 4 1 G glycine 4.6 19 1 H histidine 3.1 13 2 I isoleucine 4.8 20 2 K lysine 5.1 21 2 L leucine 11.6 48 3 M methionine 3.9 16 1 N asparagine 7.5 31 3 P proline 6.3 26 3 Q glutamine 6.1 25 2 R arginine 5.3 22 4 S serine 8.2 34 2 T threonine 6.5 27 3 V valine 3.4 14 1 W tryptophan 0.2 1 1 Y tyrosine 2.2 9 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 microphthalmia-associated transcription factor isofo... MITF 0.993 microphthalmia-associated transcription factor isofor... MITF 0.972 microphthalmia-associated transcription factor isofo... MITF 0.972 microphthalmia-associated transcription factor isofo... MITF 0.972 microphthalmia-associated transcription factor isofo... MITF 0.972 microphthalmia-associated transcription factor isofo... TFE3 0.428 transcription factor E3 TFEB 0.351 transcription factor EB TFEC 0.321 transcription factor EC isoform a TFEC 0.297 transcription factor EC isoform b USF2 0.042 upstream stimulatory factor 2 isoform 2 USF2 0.042 upstream stimulatory factor 2 isoform 1 USF1 0.038 upstream stimulatory factor 1 isoform 1 USF1 0.038 upstream stimulatory factor 1 isoform 2 SREBF1 0.036 sterol regulatory element binding transcription fact... SREBF1 0.036 sterol regulatory element binding transcription fact... SREBF2 0.033 sterol regulatory element-binding transcription fact... KIAA2018 0.033 hypothetical protein LOC205717 ARNTL 0.025 aryl hydrocarbon receptor nuclear translocator-like ... ARNTL 0.025 aryl hydrocarbon receptor nuclear translocator-like ... ARNTL 0.025 aryl hydrocarbon receptor nuclear translocator-like ... CLOCK 0.022 clock MXD4 0.022 MAD4 ARNTL2 0.021 aryl hydrocarbon receptor nuclear translocator-like ... ARNT 0.021 aryl hydrocarbon receptor nuclear translocator isofo... ARNT 0.021 aryl hydrocarbon receptor nuclear translocator isofor... MYCN 0.021 v-myc myelocytomatosis viral related oncogene, neuro... RNASEN 0.021 ribonuclease III, nuclear isoform 1 ARNT 0.019 aryl hydrocarbon receptor nuclear translocator isofo... MXD3 0.019 MAX dimerization protein 3 isoform b Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.